RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 CTAGE3PQ8IX95 158 aa16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 CAMKVQ8NCB2 501 aa16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 OR56A3Q8NH54 315 aa16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 MIEF2Q96C03 454 aa16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 TRIM44Q96DX7 344 aaPredicted RBP16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 DRC3Q9H069 523 aa16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 TSPYL1Q9H0U9 437 aa16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 SLC22A11Q9NSA0 550 aa16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 CUEDC1Q9NWM3 386 aaPredicted RBP16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 P4HTMQ9NXG6 502 aa16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 GPR83Q9NYM4 423 aa16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 CTNNAL1Q9UBT7 734 aa16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 RUVBL1Q9Y265 456 aaKnown RBP16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 MAU2Q9Y6X3 613 aa16.7■□□□□ 0.26
SCARNA2-201ENST00000458748 AGPSO00116 658 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 NRP2O60462 931 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 GUCA1CO95843 209 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 STMN1P16949 149 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 NR1D1P20393 614 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 SPRP35270 261 aaPredicted RBP16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 CDKL1Q00532 357 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 CHAF1BQ13112 559 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 NAB1Q13506 487 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 DSG2Q14126 1118 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 USP10Q14694 798 aaKnown RBP16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 RBBP7Q16576 425 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 HKDC1Q2TB90 917 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 COLEC12Q5KU26 742 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 DCAF10Q5QP82 559 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 GRTP1Q5TC63 336 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 IRAK1BP1Q5VVH5 260 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 MBOAT1Q6ZNC8 495 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 METTL27Q8N6F8 245 aaPredicted RBP16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 RBBP8Q99708 897 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 EGFL8Q99944 293 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 YIPF2Q9BWQ6 316 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 ATP13A2Q9NQ11 1180 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 C14orf105Q9NVL8 296 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 MTRF1LQ9UGC7 380 aaKnown RBP16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 DYRK1BQ9Y463 629 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 TNRC6AQ8NDV7 1962 aaKnown RBP16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 NUP210LQ5VU65 1888 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 BSNQ9UPA5 3926 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 NBASA2RRP1 2371 aa16.69■□□□□ 0.26
SCARNA2-201ENST00000458748 MDC1Q14676 2089 aaKnown RBP16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 FAM159BA6NKW6 160 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 VSTM2BA6NLU5 285 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 PCDH17O14917 1159 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 DPM1O60762 260 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 CNOT3O75175 753 aaKnown RBP16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 IPO13O94829 963 aaKnown RBP16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 UMODP07911 640 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 SLC35G6P0C7Q6 338 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 NPPBP16860 134 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 SKP1P63208 163 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 CSNK1G2P78368 415 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 CSHL1Q14406 222 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 NIPAL1Q6NVV3 410 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 SBSNQ6UWP8 590 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 PPP1R32Q7Z5V6 425 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 MMABQ96EY8 250 aaPredicted RBP16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 C10orf90Q96M02 699 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 SPSB2Q99619 263 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 CRB3Q9BUF7 120 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 SOX17Q9H6I2 414 aaPredicted RBP16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 MKKSQ9NPJ1 570 aaPredicted RBP16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 C5AR2Q9P296 337 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 TRPC4Q9UBN4 977 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 CTSFQ9UBX1 484 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 OARD1Q9Y530 152 aa16.68■□□□□ 0.26
SCARNA2-201ENST00000458748 CTAGE15A4D2H0 777 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 NPEPPSL1A6NEC2 478 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 PDGFAP04085 211 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 ZGLP1P0C6A0 271 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 CTAGE8P0CG41 777 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 CDH1P12830 882 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 PHBP35232 272 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 ATP6V0D1P61421 351 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 SLC7A5Q01650 507 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 GUCY2DQ02846 1103 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 AIMP2Q13155 320 aaKnown RBP16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 PPP1R3AQ16821 1122 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 GLE1Q53GS7 698 aaKnown RBP16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 COX15Q7KZN9 410 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 CTAGE6Q86UF2 777 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 PLD3Q8IV08 490 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 CTAGE4Q8IX94 777 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 TCAIMQ8N3R3 496 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 GALNT16Q8N428 558 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 ABHD11Q8NFV4 315 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 STT3BQ8TCJ2 826 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 TM9SF4Q92544 642 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 GPR22Q99680 433 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 MCMBPQ9BTE3 642 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 LRRC1Q9BTT6 524 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 DERL2Q9GZP9 239 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 MAP4K5Q9Y4K4 846 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 KCNE2Q9Y6J6 123 aa16.67■□□□□ 0.26
SCARNA2-201ENST00000458748 IGLV3-12A0A075B6K2 115 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms