RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	ZNF354B	Q96LW1	612 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	IL17F	Q96PD4	163 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	SIGLEC12	Q96PQ1	595 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	UTP23	Q9BRU9	249 aa	Known RBP	12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	RAB11FIP5	Q9BXF6	653 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	STOX2	Q9P2F5	926 aa	Predicted RBP	12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	CIDEB	Q9UHD4	219 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	SLC39A10	Q9ULF5	831 aa		12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953	HRNR	Q86YZ3	2850 aa	Predicted RBP	12.47	□□□□□ -0.41
SNHG17-208	ENST00000456953		A0A0J9YVX5	310 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953		F8W8V4	182 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	FFAR3	O14843	346 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	GPR42	O15529	346 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	PHF2	O75151	1096 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	SLCO2B1	O94956	709 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	FOSL1	P15407	271 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	PSMB4	P28070	264 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	RBL1	P28749	1068 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	SLC26A3	P40879	764 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	OR1C1	Q15619	314 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	PLAG1	Q6DJT9	500 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	H3F3C	Q6NXT2	135 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	GSTA5	Q7RTV2	222 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	KLHL7	Q8IXQ5	586 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	AMER3	Q8N944	861 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	FAM98A	Q8NCA5	519 aa	Known RBP	12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	MNS1	Q8NEH6	495 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	ASB5	Q8WWX0	329 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	NRGN	Q92686	78 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	LRRC45	Q96CN5	670 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	CDKN2AIPNL	Q96HQ2	116 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	PPP1R2P1	Q96PQ5	205 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	ZFYVE21	Q9BQ24	234 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	TBL1Y	Q9BQ87	522 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	HES7	Q9BYE0	225 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	C10orf88	Q9H8K7	445 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	SLC24A3	Q9HC58	644 aa		12.46	□□□□□ -0.41
SNHG17-208	ENST00000456953	HCFC1	P51610	2035 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	CCDC188	H7C350	402 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	SEC24D	O94855	1032 aa	Predicted RBP	12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	ANXA5	P08758	320 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	C8orf89	P0DMQ9	161 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	MSX1	P28360	303 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	STIP1	P31948	543 aa	Known RBP	12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	CD96	P40200	585 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	CSE1L	P55060	971 aa	Known RBP	12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	HSF1	Q00613	529 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	TFF3	Q07654	80 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	HSPA14	Q0VDF9	509 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	FOXD4	Q12950	439 aa	Predicted RBP	12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	NAA25	Q14CX7	972 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	DRICH1	Q6PGQ1	229 aa	Predicted RBP	12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	TAB3	Q8N5C8	712 aa	Predicted RBP	12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	HORMAD2	Q8N7B1	307 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	AMER2	Q8N7J2	671 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	CCDC89	Q8N998	374 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	FAM71D	Q8N9W8	422 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	SPATA4	Q8NEY3	305 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	OR2L3	Q8NG85	312 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	LILRB4	Q8NHJ6	448 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	CFAP61	Q8NHU2	1237 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	STYX	Q8WUJ0	223 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	ASZ1	Q8WWH4	475 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	METTL21A	Q8WXB1	218 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	RUNDC3B	Q96NL0	473 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	MIPEP	Q99797	713 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	GSX1	Q9H4S2	264 aa	Predicted RBP	12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	DLL4	Q9NR61	685 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	CCM2L	Q9NUG4	571 aa	Predicted RBP	12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	ASB1	Q9Y576	335 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	SCN2A	Q99250	2005 aa		12.45	□□□□□ -0.42
SNHG17-208	ENST00000456953	OR2A25	A4D2G3	310 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	CTAGE15	A4D2H0	777 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	ZNHIT1	O43257	154 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	NRP2	O60462	931 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	SUN1	O94901	812 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	ZWINT	O95229	277 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	IFNB1	P01574	187 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	CYC1	P08574	325 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	HOXD4	P09016	255 aa	Predicted RBP	12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	CTAGE8	P0CG41	777 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	ZNF24	P17028	368 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	PSMB5	P28074	263 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	CHRNB4	P30926	498 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	CCR7	P32248	378 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	COIL	P38432	576 aa	Predicted RBP	12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	KCNJ1	P48048	391 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	FNTA	P49354	379 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	C2orf54	Q08AI8	447 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	SPARCL1	Q14515	664 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	OASL	Q15646	514 aa	Known RBP	12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	CYP1B1	Q16678	543 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	MEP1A	Q16819	746 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	BTBD16	Q32M84	506 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	ANKRD20A2	Q5SQ80	823 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	ANKRD20A1	Q5TYW2	823 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	ANKRD20A3	Q5VUR7	823 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	GARNL3	Q5VVW2	1013 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	FCRLB	Q6BAA4	426 aa		12.44	□□□□□ -0.42
SNHG17-208	ENST00000456953	SPINK14	Q6IE38	97 aa		12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms