RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 PDX1P52945 283 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 RPS15AP62244 130 aaKnown RBP13.55□□□□□ -0.24
LINC00887-204ENST00000456816 PHEXP78562 749 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 BST1Q10588 318 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 TRAF3Q13114 568 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 DDX39BQ13838 428 aaKnown RBP13.55□□□□□ -0.24
LINC00887-204ENST00000456816 PUM1Q14671 1186 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00887-204ENST00000456816 C16orf72Q14CZ0 275 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 TBCCQ15814 346 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 CPSF6Q16630 551 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00887-204ENST00000456816 ARL13AQ5H913 290 aaPredicted RBP13.55□□□□□ -0.24
LINC00887-204ENST00000456816 LIPJQ5W064 366 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 GRHL2Q6ISB3 625 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 MED27Q6P2C8 311 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 FOXR1Q6PIV2 292 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 SYVN1Q86TM6 617 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 CUZD1Q86UP6 607 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 TMPRSS12Q86WS5 348 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 GALNT15Q8N3T1 639 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 PIP4P2Q8N4L2 257 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 CDYL2Q8N8U2 506 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 AGR3Q8TD06 166 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 CCT6BQ92526 530 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 ZNF75CPQ92670 426 aaPredicted RBP13.55□□□□□ -0.24
LINC00887-204ENST00000456816 CMKLR1Q99788 373 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 NTMT1Q9BV86 223 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 TRPS1Q9UHF7 1281 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 PLCL2Q9UPR0 1127 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 BTRCQ9Y297 605 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 FIS1Q9Y3D6 152 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 LOXL2Q9Y4K0 774 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 KLK4Q9Y5K2 254 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 ASXL3Q9C0F0 2248 aa13.55□□□□□ -0.24
LINC00887-204ENST00000456816 FAM149AA5PLN7 773 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 TMEM150CB9EJG8 249 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 PRAMEF4O60810 478 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 CTSVO60911 334 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 DKK1O94907 266 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 ESRRBO95718 433 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 ENO1P06733 434 aaKnown RBP13.54□□□□□ -0.24
LINC00887-204ENST00000456816 BCL6P41182 706 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 CASP2P42575 452 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 VSX2P58304 361 aaPredicted RBP13.54□□□□□ -0.24
LINC00887-204ENST00000456816 ERVPABLB-1P60509 514 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 SH3BP2P78314 561 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 CYP4F2P78329 520 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 ACY1Q03154 408 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 IFT88Q13099 833 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 TUBB3Q13509 450 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 ZRSR2Q15696 482 aaKnown RBP13.54□□□□□ -0.24
LINC00887-204ENST00000456816 GPR19Q15760 415 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 SGO1Q5FBB7 561 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 SH2D4BQ5SQS7 431 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 PRAMEF9Q5VWM5 478 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 LETMD1Q6P1Q0 360 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 CYB5D1Q6P9G0 228 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 TMIGD1Q6UXZ0 262 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 RNF44Q7L0R7 432 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 MCATQ8IVS2 390 aaKnown RBP13.54□□□□□ -0.24
LINC00887-204ENST00000456816 D2HGDHQ8N465 521 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 AFAP1L2Q8N4X5 818 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 L3MBTL4Q8NA19 623 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 ZNF740Q8NDX6 193 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 OR4K1Q8NGD4 311 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 METTL6Q8TCB7 284 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 AGAP11Q8TF27 550 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 ADAMTS14Q8WXS8 1223 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 GRAMD1AQ96CP6 724 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 WDR34Q96EX3 536 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 FCRL4Q96PJ5 515 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 NLNQ9BYT8 704 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 SLC29A3Q9BZD2 475 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 PITHD1Q9GZP4 211 aaPredicted RBP13.54□□□□□ -0.24
LINC00887-204ENST00000456816 SPNS1Q9H2V7 528 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 ELOVL6Q9H5J4 265 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 FAM60AQ9NP50 221 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 DLL3Q9NYJ7 618 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 SEMA5BQ9P283 1151 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 SNX6Q9UNH7 406 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 PCDHGA11Q9Y5H2 935 aa13.54□□□□□ -0.24
LINC00887-204ENST00000456816 CCDC187A0A096LP49 1063 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 A0A1B0GTL3 188 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 ANKDD1BA6NHY2 528 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 UBFD1O14562 309 aaKnown RBP13.53□□□□□ -0.24
LINC00887-204ENST00000456816 POLR3GO15318 223 aaPredicted RBP13.53□□□□□ -0.24
LINC00887-204ENST00000456816 ITM2AO43736 263 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 WFS1O76024 890 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 SNUPNO95149 360 aaKnown RBP13.53□□□□□ -0.24
LINC00887-204ENST00000456816 CHEK2O96017 543 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 KRT6AP02538 564 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 STATHP02808 62 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 KRT6BP04259 564 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 CAPN1P07384 714 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 JMJD7P0C870 316 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 FOLR1P15328 257 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 CD22P20273 847 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 KRT6CP48668 564 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 GUCY1A3Q02108 690 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 PCDH1Q08174 1060 aa13.53□□□□□ -0.24
LINC00887-204ENST00000456816 TARDBPQ13148 414 aaKnown RBP eCLIP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms