RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 GPSM1Q86YR5 675 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 CAMKVQ8NCB2 501 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 OR2Y1Q8NGV0 311 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 THAP11Q96EK4 314 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 ABHD17AQ96GS6 310 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 ZNF71Q9NQZ8 489 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 ENAMQ9NRM1 1142 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 IGSF10Q6WRI0 2623 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 FEZF1A0PJY2 475 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 KLF7O75840 302 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 C1QL1O75973 258 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 ACSL3O95573 720 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 ITGAXP20702 1163 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 CHAF1BQ13112 559 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 PPP1R3AQ16821 1122 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 MROH9Q5TGP6 573 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 MRPL14Q6P1L8 145 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 APLFQ8IW19 511 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 SLC5A11Q8WWX8 675 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 MMABQ96EY8 250 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 ING2Q9H160 280 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 CDC42EP4Q9H3Q1 356 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 SLC22A11Q9NSA0 550 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 CD274Q9NZQ7 290 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 ZNF282Q9UDV7 671 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 NXT1Q9UKK6 140 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 SH2B3Q9UQQ2 575 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 SLC22A14Q9Y267 594 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 KCNE2Q9Y6J6 123 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 CCDC88CQ9P219 2028 aa17.23■□□□□ 0.35
PDLIM2-215ENST00000456545 MDC1Q14676 2089 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 KCNE1BA0A087WTH5 132 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 B8ZZF3 427 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 OR1F1O43749 312 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 H2AFYO75367 372 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 WDR47O94967 919 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 IGHEP01854 428 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 C1QAP02745 245 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 STATHP02808 62 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 SERPIND1P05546 499 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 RHOXF2BP0C7M4 288 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 CD1DP15813 335 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 AVPR1BP47901 424 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 NKG7Q16617 165 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 MED25Q71SY5 747 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 RELL1Q8IUW5 271 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 TCAIMQ8N3R3 496 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 TMEM102Q8N9M5 508 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 ADAMTS17Q8TE56 1095 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 SLC13A3Q8WWT9 602 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 MIEF2Q96C03 454 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 MVB12AQ96EY5 273 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 VPS50Q96JG6 964 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 FER1L6-AS2Q96M78 137 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 TSNARE1Q96NA8 513 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 RHOXF2Q9BQY4 288 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 DRC3Q9H069 523 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 SOX17Q9H6I2 414 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 WDR54Q9H977 334 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 CNOT10Q9H9A5 744 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 NMRAL1Q9HBL8 299 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 WWOXQ9NZC7 414 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 RNF112Q9ULX5 631 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 ACOT9Q9Y305 439 aa17.22■□□□□ 0.35
PDLIM2-215ENST00000456545 ONECUT2O95948 504 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 INHBAP08476 426 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 MEF2AQ02078 507 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 ATP1A4Q13733 1029 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 TGFBIQ15582 683 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 ZKSCAN8Q15776 578 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 ZXDCQ2QGD7 858 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 LACTB2Q53H82 288 aaPredicted RBP17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 CATSPEREQ5SY80 951 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 SHISA6Q6ZSJ9 500 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 TAOK1Q7L7X3 1001 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 CMC1Q7Z7K0 106 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 ASPGQ86U10 573 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 PTRH1Q86Y79 214 aaKnown RBP17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 PRSS58Q8IYP2 241 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 DTWD1Q8N5C7 304 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 MFSD9Q8NBP5 474 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 STAG3L4Q8TBR4 150 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 EXT2Q93063 718 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 NEIL2Q969S2 332 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 C10orf90Q96M02 699 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 OR4K3Q96R72 315 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 AIF1LQ9BQI0 150 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 SLC25A23Q9BV35 468 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 ACSS3Q9H6R3 686 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 PRM3Q9NNZ6 103 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 TRPC4Q9UBN4 977 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 CTSFQ9UBX1 484 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 NFU1Q9UMS0 254 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 LOC400499M0QZD8 3231 aa17.21■□□□□ 0.35
PDLIM2-215ENST00000456545 A0A0A6YYC8 382 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-215ENST00000456545 A6NL46 340 aa17.2■□□□□ 0.34
PDLIM2-215ENST00000456545 POC1B-GALNT4F8VUJ3 575 aa17.2■□□□□ 0.34
PDLIM2-215ENST00000456545 I3L1I5 382 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-215ENST00000456545 P2RX6O15547 441 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms