RNA–Protein interactions for RNA: ENST00000455540.2

CYCSP53-201, Transcript of cytochrome c, somatic pseudogene 53, humanhuman

BASIC

Gene CYCSP53, Length 265 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP53-201ENST00000455540 ANKEF1Q9NU02 776 aa5.04□□□□□ -1.6
CYCSP53-201ENST00000455540 ATAD3AQ9NVI7 634 aa5.04□□□□□ -1.6
CYCSP53-201ENST00000455540 MIS18AQ9NYP9 233 aa5.04□□□□□ -1.6
CYCSP53-201ENST00000455540 DAPK2Q9UIK4 370 aa5.04□□□□□ -1.6
CYCSP53-201ENST00000455540 RIPK3Q9Y572 518 aa5.04□□□□□ -1.6
CYCSP53-201ENST00000455540 KDM3BQ7LBC6 1761 aa5.04□□□□□ -1.6
CYCSP53-201ENST00000455540 GOLGB1Q14789 3259 aaKnown RBP5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 DLG5Q8TDM6 1919 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 USP42Q9H9J4 1324 aaKnown RBP5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 UBR3Q6ZT12 1888 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 ZNF197O14709 1029 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 ARHGEF9O43307 516 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 CDC123O75794 336 aaPredicted RBP5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 ADRB2P07550 413 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 HOXB7P09629 217 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 SAGP10523 405 aaPredicted RBP5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 EEF1DP29692 281 aaKnown RBP5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 RAB28P51157 221 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 SNRPD1P62314 119 aaKnown RBP5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 ERMARDQ5T6L9 678 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 C6orf163Q5TEZ5 329 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 ZC2HC1BQ5TFG8 222 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 TRIM65Q6PJ69 517 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 TMPRSS11BQ86T26 416 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 IQCHQ86VS3 1027 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 NDUFAF2Q8N183 169 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 CTCFLQ8NI51 663 aaPredicted RBP5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 HDAC11Q96DB2 347 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 MAGED4Q96JG8 741 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 BCCIPQ9P287 314 aaKnown RBP eCLIP5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 NARFQ9UHQ1 456 aa5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 CPSF3Q9UKF6 684 aaKnown RBP5.03□□□□□ -1.6
CYCSP53-201ENST00000455540 TUBGCP6Q96RT7 1819 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 IL16Q14005 1332 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 LAMB4A4D0S4 1761 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 ENO4A6NNW6 628 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 O00370 1275 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 KHDRBS3O75525 346 aaKnown RBP5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 MMP10P09238 476 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 MYBL1P10243 752 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 CDH3P22223 829 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 B3GALT5-AS1P59052 145 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 FCN2Q15485 313 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 CA9Q16790 459 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 LETM2Q2VYF4 491 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 KRTAP27-1Q3LI81 207 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 TCP11X2Q5H9J9 407 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 SLC35D3Q5M8T2 416 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 CST9LP1Q5W188 147 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 KIF6Q6ZMV9 814 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 G2E3Q7L622 706 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 CCDC89Q8N998 374 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 THAP8Q8NA92 274 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 TMEM178AQ8NBL3 297 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 OLIG1Q8TAK6 271 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 SNRNP27Q8WVK2 155 aaKnown RBP5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 LRRC3BQ96PB8 259 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 OPRPNQ99935 248 aaPredicted RBP5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 ERVMER34-1Q9H9K5 563 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 Q9N2K0 584 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 BARHL2Q9NY43 387 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 OR6C2Q9NZP2 312 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 MAN1B1Q9UKM7 699 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 MRPS28Q9Y2Q9 187 aaKnown RBP5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 USP16Q9Y5T5 823 aa5.02□□□□□ -1.61
CYCSP53-201ENST00000455540 C4AP0C0L4 1744 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 PTGESO14684 152 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 FIBPO43427 364 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 GLRA3O75311 464 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 ZNF853P0CG23 659 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 SMIM18P0DKX4 95 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 CSTF2P33240 577 aaKnown RBP eCLIP5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 HILS1P60008 231 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 KRTAP10-6P60371 365 aaPredicted RBP5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 RALGDSQ12967 914 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 ITGA7Q13683 1181 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 PHKG1Q16816 387 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 SGSM1Q2NKQ1 1148 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 VWC2Q2TAL6 325 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 UGT3A2Q3SY77 523 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 PHLDA2Q53GA4 152 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 ADAMTSL4-AS1Q5T5F5 129 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 LCN1P1Q5VSP4 162 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 C16orf54Q6UWD8 224 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 KIRREL3Q8IZU9 778 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 EID3Q8N140 333 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 RYBPQ8N488 228 aaPredicted RBP5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 RAB42Q8N4Z0 105 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 DBF4BQ8NFT6 615 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 OR13C3Q8NGS6 347 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 OR2T11Q8NH01 316 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 THOC1Q96FV9 657 aaKnown RBP5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 ART5Q96L15 291 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 FEVQ99581 238 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 FUCA2Q9BTY2 467 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 OR2B2Q9GZK3 357 aa5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 TMX4Q9H1E5 349 aaPredicted RBP5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 CNOT10Q9H9A5 744 aaKnown RBP5.01□□□□□ -1.61
CYCSP53-201ENST00000455540 P4HTMQ9NXG6 502 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms