RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 GIPC1O14908 333 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 MAGEB3O15480 346 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 RASAL1O95294 804 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 CPNE6O95741 557 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 JUNP05412 331 aaKnown RBP15.33■□□□□ 0.04
SNX17-204ENST00000453453 FASP25445 335 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 MAOBP27338 520 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 STT3AP46977 705 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 CLCNKAP51800 687 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 HK3P52790 923 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 TMBIM6P55061 237 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 C21orf59P57076 290 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 STX1BP61266 288 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 ILF3Q12906 894 aaKnown RBP eCLIP15.33■□□□□ 0.04
SNX17-204ENST00000453453 LYSMD4Q5XG99 296 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 LINC00299Q6ZSB3 139 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 HMGCLL1Q8TB92 370 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 TSPEARQ8WU66 669 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 SNRNP27Q8WVK2 155 aaKnown RBP15.33■□□□□ 0.04
SNX17-204ENST00000453453 CENPNQ96H22 339 aaPredicted RBP15.33■□□□□ 0.04
SNX17-204ENST00000453453 PLEKHA8Q96JA3 519 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 GPATCH1Q9BRR8 931 aaKnown RBP15.33■□□□□ 0.04
SNX17-204ENST00000453453 PCDHAC1Q9H158 963 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 NOL11Q9H8H0 719 aaKnown RBP15.33■□□□□ 0.04
SNX17-204ENST00000453453 ABCA7Q8IZY2 2146 aa15.33■□□□□ 0.04
SNX17-204ENST00000453453 A0A1W2PR77 199 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 PDZK1P1A8MUH7 402 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 H3BMQ9 156 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 TLR4O00206 839 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 SOCS2O14508 198 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 SERPINB7O75635 380 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 SUPT7LO94864 414 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 TCN1P20061 433 aaPredicted RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 EEF1DP29692 281 aaKnown RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 HALP42357 657 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 DHPSP49366 369 aaPredicted RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 HNMTP50135 292 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 FZD2Q14332 565 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 TEAD4Q15561 434 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 ZNF678Q5SXM1 525 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 ANKS6Q68DC2 871 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 ISLR2Q6UXK2 745 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 DCDC5Q6ZRR9 648 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 NCCRP1Q6ZVX7 275 aaPredicted RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 RASGRP3Q8IV61 690 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 MAML2Q8IZL2 1156 aaPredicted RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 ZNF786Q8N393 782 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 MINDY1Q8N5J2 469 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 FBXO15Q8NCQ5 510 aaPredicted RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 ATL1Q8WXF7 558 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 PPWD1Q96BP3 646 aaKnown RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 CCDC138Q96M89 665 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 COG8Q96MW5 612 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 C1orf50Q9BV19 199 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 GSDMCQ9BYG8 508 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 ACTR3BQ9P1U1 418 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 ASF1AQ9Y294 204 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 DHRS12A0PJE2 317 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 ARHGEF33A8MVX0 844 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 H0YAE9 185 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 PLOD2O00469 737 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 DLGAP1O14490 977 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 SCAMP1O15126 338 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 BCAT2O15382 392 aaPredicted RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 UMPSP11172 480 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 CTSEP14091 401 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 GNSP15586 552 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 PSMA4P25789 261 aaKnown RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 RPL10P27635 214 aaKnown RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 ACADLP28330 430 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 CNR2P34972 360 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 CAPGP40121 348 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 BDKRB1P46663 353 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 MRPL19P49406 292 aaKnown RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 BCAP31P51572 246 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 AFF3P51826 1226 aaKnown RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 CTBSQ01459 385 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 EIF2B5Q13144 721 aaKnown RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 PMS2CLQ68D20 193 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 METTL2BQ6P1Q9 378 aaKnown RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 XKR5Q6UX68 686 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 CEP68Q76N32 757 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 MINDY2Q8NBR6 621 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 FAM156AQ8NDB6 213 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 PAPD5Q8NDF8 572 aaKnown RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 UBTD2Q8WUN7 234 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 TFGQ92734 400 aaPredicted RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 RHBDF1Q96CC6 855 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 MAGED4Q96JG8 741 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 MARK4Q96L34 752 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 ZDHHC5Q9C0B5 715 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 TRIT1Q9H3H1 467 aaKnown RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 LIN28AQ9H9Z2 209 aaKnown RBP15.32■□□□□ 0.04
SNX17-204ENST00000453453 PLEKHM1Q9Y4G2 1056 aa15.32■□□□□ 0.04
SNX17-204ENST00000453453 FUOMA2VDF0 154 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 ZNF839A8K0R7 811 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 TIPRLO75663 272 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 C1orf105O95561 183 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 OCM2P0CE71 109 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 OCMP0CE72 109 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms