RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ZNF385CQ66K41 422 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-202ENST00000452372 SULT1C3Q6IMI6 304 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 WDR93Q6P2C0 686 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 THOC6Q86W42 341 aaKnown RBP19.06■□□□□ 0.64
COL9A3-202ENST00000452372 KLHDC8AQ8IYD2 350 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 ABHD11Q8NFV4 315 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 RHEBL1Q8TAI7 183 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 CT55Q8WUE5 264 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 ATOH8Q96SQ7 321 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 CCDC77Q9BR77 488 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 FAM117AQ9C073 453 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 CHST8Q9H2A9 424 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 IL17BQ9UHF5 180 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 SLC22A14Q9Y267 594 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 PCDHGA6Q9Y5G7 932 aa19.06■□□□□ 0.64
COL9A3-202ENST00000452372 KCNE1BA0A087WTH5 132 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 HAT1O14929 419 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 TAPBPO15533 448 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 SLC28A2O43868 658 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 CDH1P12830 882 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 AGXTP21549 392 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 NFKB2Q00653 900 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 DNASE1L3Q13609 305 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 ACAP2Q15057 778 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 LCN10Q6JVE6 187 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 CNPY4Q8N129 248 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 TTC29Q8NA56 475 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-202ENST00000452372 PDPRQ8NCN5 879 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 OR4K1Q8NGD4 311 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 PROKR1Q8TCW9 393 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 UBLCP1Q8WVY7 318 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-202ENST00000452372 GPR78Q96P69 363 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 GBP5Q96PP8 586 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 ARHGAP9Q9BRR9 750 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 GPR87Q9BY21 358 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 VPS11Q9H270 941 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 SYNPO2LQ9H987 977 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 TXLNGQ9NUQ3 528 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 CD274Q9NZQ7 290 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 DHCR7Q9UBM7 475 aaKnown RBP19.05■□□□□ 0.64
COL9A3-202ENST00000452372 PTBP2Q9UKA9 531 aaKnown RBP19.05■□□□□ 0.64
COL9A3-202ENST00000452372 KCNE2Q9Y6J6 123 aa19.05■□□□□ 0.64
COL9A3-202ENST00000452372 NBASA2RRP1 2371 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 KERAO60938 352 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 IPO13O94829 963 aaKnown RBP19.04■□□□□ 0.64
COL9A3-202ENST00000452372 EIF2S1P05198 315 aaKnown RBP19.04■□□□□ 0.64
COL9A3-202ENST00000452372 GDF5P43026 501 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 CCR8P51685 355 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 RPS15AP62244 130 aaKnown RBP19.04■□□□□ 0.64
COL9A3-202ENST00000452372 C18orf21Q32NC0 220 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-202ENST00000452372 TIFABQ6ZNK6 161 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 TTLL10Q6ZVT0 673 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 PLD3Q8IV08 490 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 SLC5A11Q8WWX8 675 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 NEIL2Q969S2 332 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 RERGQ96A58 199 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-202ENST00000452372 MTBPQ96DY7 904 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 THAP11Q96EK4 314 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 CNOT10Q9H9A5 744 aaKnown RBP19.04■□□□□ 0.64
COL9A3-202ENST00000452372 CUTCQ9NTM9 273 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 GEMIN8Q9NWZ8 242 aaKnown RBP19.04■□□□□ 0.64
COL9A3-202ENST00000452372 NUDT4Q9NZJ9 180 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.04■□□□□ 0.643e-11■■□□□ 14
COL9A3-202ENST00000452372 DYRK1BQ9Y463 629 aa19.04■□□□□ 0.64
COL9A3-202ENST00000452372 V9GYY5 206 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-202ENST00000452372 UBR5O95071 2799 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-202ENST00000452372 HYKKA2RU49 373 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 ZNF891A8MT65 544 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-202ENST00000452372 TXNDC9O14530 226 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 DSCR3O14972 297 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 NKX2-8O15522 239 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 KATNA1O75449 491 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 S100BP04271 92 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-202ENST00000452372 CAPN1P07384 714 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 RAB40ALP0C0E4 278 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 COL6A2P12110 1019 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 ALAS2P22557 587 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 GRK3P35626 688 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 EMP3P54852 163 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 RPS15P62841 145 aaKnown RBP19.03■□□□□ 0.64
COL9A3-202ENST00000452372 DCDP81605 110 aaKnown RBP19.03■□□□□ 0.64
COL9A3-202ENST00000452372 ERCC6LQ2NKX8 1250 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 PRTGQ2VWP7 1150 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 CRTC2Q53ET0 693 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-202ENST00000452372 C1orf189Q5VU69 101 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 KLC3Q6P597 504 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 PLD6Q8N2A8 252 aaKnown RBP19.03■□□□□ 0.64
COL9A3-202ENST00000452372 CSNK1A1LQ8N752 337 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 TMEM79Q9BSE2 394 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 SARGQ9BW04 601 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 NLNQ9BYT8 704 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 WWOXQ9NZC7 414 aa19.03■□□□□ 0.64
COL9A3-202ENST00000452372 FARSAQ9Y285 508 aaKnown RBP19.03■□□□□ 0.64
COL9A3-202ENST00000452372 MRPS18BQ9Y676 258 aaKnown RBP19.03■□□□□ 0.64
COL9A3-202ENST00000452372 FLNCQ14315 2725 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 HECTD1Q9ULT8 2610 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 IQANK1A0A1B0GTG1 560 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 A0A1B0GX78 115 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 SYCE1LA8MT33 242 aa19.02■□□□□ 0.64
COL9A3-202ENST00000452372 SUV39H1O43463 412 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms