RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 LIMK1P53667 647 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 KRTAP10-3P60369 221 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 IRX4P78413 519 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 AIMP1Q12904 312 aaKnown RBP3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 SGCGQ13326 291 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 OPCMLQ14982 345 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 TOMM20Q15388 145 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 CTR9Q6PD62 1173 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 TMED8Q6PL24 325 aaPredicted RBP3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 PCGF5Q86SE9 256 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 LMNTD2Q8IXW0 634 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 ANKRD13CQ8N6S4 541 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 ATP8B4Q8TF62 1192 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 TSACCQ96A04 125 aaPredicted RBP3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 FAM218AQ96MZ4 157 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 ZNF558Q96NG5 402 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 AGAP4Q96P64 663 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 TDRD1Q9BXT4 1180 aaKnown RBP3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 HOXD1Q9GZZ0 328 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 B3GAT2Q9NPZ5 323 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 BCCIPQ9P287 314 aaKnown RBP eCLIP3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 ZHX2Q9Y6X8 837 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 KIF13AQ9H1H9 1805 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 SERINC4A6NH21 518 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 P4HA2O15460 535 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 CAPN2P17655 700 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 ELAVL4P26378 380 aaKnown RBP3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 LY6DQ14210 128 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 C16orf54Q6UWD8 224 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 SLC24A5Q71RS6 500 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 CHMP1BQ7LBR1 199 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 ZER1Q7Z7L7 766 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 MFN1Q8IWA4 741 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 SPAG16Q8N0X2 631 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 Q8N377 158 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 METTL4Q8N3J2 472 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 FAM89BQ8N5H3 189 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 PI4KAP1Q8N8J0 262 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 AMER3Q8N944 861 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 OR6J1Q8NGC5 347 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 OR5T2Q8NGG2 359 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 CNRIP1Q96F85 164 aaPredicted RBP3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 ATXN7L3BQ96GX2 97 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 CFAP57Q96MR6 1250 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 LRRC3BQ96PB8 259 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 KLHL5Q96PQ7 755 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 SOSTQ9BQB4 213 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 OVOL2Q9BRP0 275 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 CENPOQ9BU64 300 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 XAB2Q9HCS7 855 aaKnown RBP3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 ANKEF1Q9NU02 776 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 PRDM4Q9UKN5 801 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 WIPI2Q9Y4P8 454 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 CSAG2Q9Y5P2 127 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 SELENOKQ9Y6D0 94 aa3.59□□□□□ -1.83
AC003001.1-201ENST00000443247 FANCD2Q9BXW9 1451 aa3.59□□□□□ -1.84
AC003001.1-201ENST00000443247 ERCC6L2Q5T890 1561 aa3.59□□□□□ -1.84
AC003001.1-201ENST00000443247 WDR97A6NE52 1622 aa3.59□□□□□ -1.84
AC003001.1-201ENST00000443247 LOC105371242A0A075B767 164 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 URADA6NGE7 173 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 UBE2CO00762 179 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 CEACAM4O75871 244 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 PDHA2P29803 388 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 PPP5CP53041 499 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 DCDC1P59894 354 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 DLK1P80370 383 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 PAX8Q06710 450 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 ILF2Q12905 390 aaKnown RBP3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 CST9LP1Q5W188 147 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 LRTM2Q8N967 370 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 TDRD5Q8NAT2 981 aaKnown RBP3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 SLC45A3Q96JT2 553 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 TRIM6Q9C030 488 aaPredicted RBP3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 PANK3Q9H999 370 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 ELF5Q9UKW6 265 aaPredicted RBP3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 PA2G4Q9UQ80 394 aaKnown RBP3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 SYNJ1O43426 1573 aa3.58□□□□□ -1.84
AC003001.1-201ENST00000443247 ASB14A6NK59 587 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 GGPS1O95749 300 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 LDHCP07864 332 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 THEGLP0DJG4 465 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 CETN2P41208 172 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 COX10Q12887 443 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 TRA2AQ13595 282 aaKnown RBP eCLIP3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 FAM189A2Q15884 450 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 PTGISQ16647 500 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 KYNUQ16719 465 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 LACTB2Q53H82 288 aaPredicted RBP3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 OR4C11Q6IEV9 310 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 KRT80Q6KB66 452 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 GDPGP1Q6ZNW5 385 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 RCOR2Q8IZ40 523 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 GPC2Q8N158 579 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 OR2L2Q8NH16 312 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 C9orf43Q8TAL5 461 aaPredicted RBP3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 LRRC15Q8TF66 581 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 MRPS27Q92552 414 aaKnown RBP3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 RASL10AQ92737 203 aa3.57□□□□□ -1.84
AC003001.1-201ENST00000443247 SPATA33Q96N06 139 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms