RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 RAD51AP1Q96B01 352 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 RASSF1Q9NS23 344 aa13.12□□□□□ -0.31
LINC00642-202ENST00000442515 OR2W5A6NFC9 320 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 USP27XA6NNY8 438 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 IQCF5A8MTL0 148 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 HS6ST1O60243 411 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 HEXAP06865 529 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 TPH1P17752 444 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 RFC3P40938 356 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 SNRPNP63162 240 aaKnown RBP13.11□□□□□ -0.31
LINC00642-202ENST00000442515 POU6F1Q14863 301 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 NR1I3Q14994 352 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 SLC18A3Q16572 532 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 CMPK2Q5EBM0 449 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 ANKRD20A2Q5SQ80 823 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 ANKRD20A1Q5TYW2 823 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 ANKRD20A3Q5VUR7 823 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 PAPD4Q6PIY7 484 aaKnown RBP13.11□□□□□ -0.31
LINC00642-202ENST00000442515 PAMR1Q6UXH9 720 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 CAMKMTQ7Z624 323 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 ZNF227Q86WZ6 799 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 POGLUT1Q8NBL1 392 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 MYRIPQ8NFW9 859 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 PLCD4Q9BRC7 762 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 ACAT2Q9BWD1 397 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 EDARQ9UNE0 448 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 NFS1Q9Y697 457 aa13.11□□□□□ -0.31
LINC00642-202ENST00000442515 HRNRQ86YZ3 2850 aaPredicted RBP13.1□□□□□ -0.31
LINC00642-202ENST00000442515 HCFC1P51610 2035 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 IGKV1-8A0A0C4DH67 115 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 CCDC162PA2VCL2 907 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 SOWAHDA6NJG2 315 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 F8W8V4 182 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 P2RX6O15547 441 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 SPOPO43791 374 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 PRMT3O60678 531 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 PHF2O75151 1096 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 C1orf105O95561 183 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 APOA4P06727 396 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 TFEBP19484 476 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 COMTP21964 271 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 CMPK1P30085 196 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 SLC1A1P43005 524 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 AGTR2P50052 363 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 TAS2R50P59544 299 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 FAM53BQ14153 422 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 EMC4Q5J8M3 183 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 ARHGAP11AQ6P4F7 1023 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 TTC23LQ6PF05 361 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 ARSKQ6UWY0 536 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 ACAD11Q709F0 780 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 PAQR7Q86WK9 346 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 CDC20BQ86Y33 519 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 RERGQ96A58 199 aaPredicted RBP13.1□□□□□ -0.31
LINC00642-202ENST00000442515 OR2A5Q96R48 311 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 CDCP1Q9H5V8 836 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 PLSCR2Q9NRY7 297 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 PIH1D1Q9NWS0 290 aaKnown RBP13.1□□□□□ -0.31
LINC00642-202ENST00000442515 TTC7AQ9ULT0 858 aaPredicted RBP13.1□□□□□ -0.31
LINC00642-202ENST00000442515 CAPN11Q9UMQ6 739 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 RUVBL2Q9Y230 463 aaKnown RBP13.1□□□□□ -0.31
LINC00642-202ENST00000442515 ALG6Q9Y672 507 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 COL6A5A8TX70 2615 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 GTF3C1Q12789 2109 aa13.1□□□□□ -0.31
LINC00642-202ENST00000442515 NDC80O14777 642 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 PSTPIP1O43586 416 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 PSMA3P25788 255 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 TPP2P29144 1249 aaPredicted RBP13.09□□□□□ -0.31
LINC00642-202ENST00000442515 AVPR1BP47901 424 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 CYB561P49447 251 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 SNTB1Q13884 538 aaKnown RBP13.09□□□□□ -0.31
LINC00642-202ENST00000442515 DEFB113Q30KQ7 82 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 KLHDC8BQ8IXV7 354 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 KRT222Q8N1A0 295 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 LRRN4CLQ8ND94 238 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 ACRBPQ8NEB7 543 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 OR5M3Q8NGP4 307 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 OR9A4Q8NGU2 314 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 GOT1L1Q8NHS2 421 aaPredicted RBP13.09□□□□□ -0.31
LINC00642-202ENST00000442515 LRRC45Q96CN5 670 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 SPATA13Q96N96 652 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 PPP1R2P1Q96PQ5 205 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 ALS2CR12Q96Q35 445 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 FERMT1Q9BQL6 677 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 TSSK1BQ9BXA7 367 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 SLC6A16Q9GZN6 736 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 MRPS30Q9NP92 439 aaKnown RBP13.09□□□□□ -0.31
LINC00642-202ENST00000442515 LMBRD1Q9NUN5 540 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 SPATA7Q9P0W8 599 aa13.09□□□□□ -0.31
LINC00642-202ENST00000442515 MROH6A6NGR9 719 aa13.08□□□□□ -0.32
LINC00642-202ENST00000442515 APOC4-APOC2K7ER74 178 aa13.08□□□□□ -0.32
LINC00642-202ENST00000442515 ATE1O95260 518 aa13.08□□□□□ -0.32
LINC00642-202ENST00000442515 SERPINC1P01008 464 aa13.08□□□□□ -0.32
LINC00642-202ENST00000442515 APOC2P02655 101 aa13.08□□□□□ -0.32
LINC00642-202ENST00000442515 AOAHP28039 575 aa13.08□□□□□ -0.32
LINC00642-202ENST00000442515 HOXC12P31275 282 aa13.08□□□□□ -0.32
LINC00642-202ENST00000442515 XCR1P46094 333 aa13.08□□□□□ -0.32
LINC00642-202ENST00000442515 ITGA8P53708 1063 aa13.08□□□□□ -0.32
LINC00642-202ENST00000442515 PTK6Q13882 451 aa13.08□□□□□ -0.32
LINC00642-202ENST00000442515 USP10Q14694 798 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms