RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 TRAM1L1Q8N609 369 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 NFKBIDQ8NI38 313 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 RIT1Q92963 219 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 IGSF5Q9NSI5 407 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 CCDC59Q9P031 241 aaKnown RBP12.52□□□□□ -0.41
BRPF3-203ENST00000441123 HCN4Q9Y3Q4 1203 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 MYH15Q9Y2K3 1946 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 PFKMP08237 780 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 UQCRC2P22695 453 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 AKT2P31751 481 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 PITX1P78337 314 aaPredicted RBP12.52□□□□□ -0.41
BRPF3-203ENST00000441123 GANABQ14697 944 aaKnown RBP12.52□□□□□ -0.41
BRPF3-203ENST00000441123 SUZ12Q15022 739 aaKnown RBP12.52□□□□□ -0.41
BRPF3-203ENST00000441123 TPRG1LQ5T0D9 272 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 MEDAGQ5VYS4 303 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 PJA1Q8NG27 643 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 OR9A1PQ8NGU1 263 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 BCL7BQ9BQE9 202 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 COMMD4Q9H0A8 199 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 TRIM39Q9HCM9 518 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 ARMC1Q9NVT9 282 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 UPB1Q9UBR1 384 aa12.52□□□□□ -0.41
BRPF3-203ENST00000441123 ARAP2Q8WZ64 1704 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 CCDC85CA6NKD9 419 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 CNMDO75829 334 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 BMP2P12643 396 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 BDKRB1P46663 353 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 CDKN2DP55273 166 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 ZNF367Q7RTV3 350 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 SLC15A3Q8IY34 581 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 GPR135Q8IZ08 494 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 FAM46DQ8NEK8 389 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 CLIP3Q96DZ5 547 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 REEP4Q9H6H4 257 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 ABCB9Q9NP78 766 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 SNTG1Q9NSN8 517 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 SIPA1L3O60292 1781 aaPredicted RBP12.51□□□□□ -0.41
BRPF3-203ENST00000441123 A0A0D9SEW6 157 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 COCHO43405 550 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 RASGRP1O95267 797 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 SLC6A4P31645 630 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 CSTF2P33240 577 aaKnown RBP eCLIP12.51□□□□□ -0.41
BRPF3-203ENST00000441123 FADDQ13158 208 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 PDGFRLQ15198 375 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 FAM129CQ86XR2 697 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 DCUN1D3Q8IWE4 304 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 TMEM80Q96HE8 168 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 MGME1Q9BQP7 344 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 DSN1Q9H410 356 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 DAPL1A0PJW8 107 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 CAPN14A8MX76 684 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 MAGEB3O15480 346 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 TGFB1P01137 390 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 KLK1P06870 262 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 FGF4P08620 206 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 MYF6P23409 242 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 AVPR1BP47901 424 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 DIO3P55073 304 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 TLR1Q15399 786 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 ZCCHC12Q6PEW1 402 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 NAPRTQ6XQN6 538 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 FAM124AQ86V42 546 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 IGSF8Q969P0 613 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 LMLNQ96KR4 655 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 MKKSQ9NPJ1 570 aaPredicted RBP12.51□□□□□ -0.41
BRPF3-203ENST00000441123 DFNA5O60443 496 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 AOC2O75106 756 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 PEPDP12955 493 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 HLCSP50747 726 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 PLA2G16P53816 162 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 OR2B6P58173 313 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 KCNC4Q03721 635 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 CADM2Q8N3J6 435 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 OR10T2Q8NGX3 314 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 RBM18Q96H35 190 aaKnown RBP12.51□□□□□ -0.41
BRPF3-203ENST00000441123 IFT27Q9BW83 186 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 RNF6Q9Y252 685 aa12.51□□□□□ -0.41
BRPF3-203ENST00000441123 A0A1W2PQ45 241 aaPredicted RBP12.5□□□□□ -0.41
BRPF3-203ENST00000441123 A0A1W2PQY0 241 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 AGTR2P50052 363 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 GRB7Q14451 532 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 MEP1AQ16819 746 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 ZNF404Q494X3 552 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 CDKL4Q5MAI5 379 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 TXNDC8Q6A555 127 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 RPS27LQ71UM5 84 aaKnown RBP12.5□□□□□ -0.41
BRPF3-203ENST00000441123 KRT77Q7Z794 578 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 CTU1Q7Z7A3 348 aaKnown RBP12.5□□□□□ -0.41
BRPF3-203ENST00000441123 ZNF354BQ96LW1 612 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 MMP27Q9H306 513 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 BACE2Q9Y5Z0 518 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 GPC6Q9Y625 555 aaPredicted RBP12.5□□□□□ -0.41
BRPF3-203ENST00000441123 SPIN1Q9Y657 262 aaPredicted RBP12.5□□□□□ -0.41
BRPF3-203ENST00000441123 COL18A1P39060 1754 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 KLHL33A6NCF5 533 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 KMOO15229 486 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 TBX1O43435 398 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 SCN2BO60939 215 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 SNAPC5O75971 98 aa12.5□□□□□ -0.41
BRPF3-203ENST00000441123 EFNA1P20827 205 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms