RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 FMO2Q99518 471 aa9.98□□□□□ -0.81
MCF2L-216ENST00000439475 SLC25A23Q9BV35 468 aa9.98□□□□□ -0.81
MCF2L-216ENST00000439475 CNOT10Q9H9A5 744 aaKnown RBP9.98□□□□□ -0.81
MCF2L-216ENST00000439475 NMRAL1Q9HBL8 299 aa9.98□□□□□ -0.81
MCF2L-216ENST00000439475 ATP13A2Q9NQ11 1180 aa9.98□□□□□ -0.81
MCF2L-216ENST00000439475 ZNF71Q9NQZ8 489 aaPredicted RBP9.98□□□□□ -0.81
MCF2L-216ENST00000439475 SEMA3GQ9NS98 782 aa9.98□□□□□ -0.81
MCF2L-216ENST00000439475 ZDHHC18Q9NUE0 388 aa9.98□□□□□ -0.81
MCF2L-216ENST00000439475 CUEDC1Q9NWM3 386 aaPredicted RBP9.98□□□□□ -0.81
MCF2L-216ENST00000439475 DMGDHQ9UI17 866 aaKnown RBP9.98□□□□□ -0.81
MCF2L-216ENST00000439475 ANAPC2Q9UJX6 822 aa9.98□□□□□ -0.81
MCF2L-216ENST00000439475 RUVBL1Q9Y265 456 aaKnown RBP9.98□□□□□ -0.81
MCF2L-216ENST00000439475 IKBKGQ9Y6K9 419 aa9.98□□□□□ -0.81
MCF2L-216ENST00000439475 MAU2Q9Y6X3 613 aa9.98□□□□□ -0.81
MCF2L-216ENST00000439475 NPEPPSL1A6NEC2 478 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 URADA6NGE7 173 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 H0YIG0 161 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 HAT1O14929 419 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 OR1F1O43749 312 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 SLC28A2O43868 658 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 PIAS1O75925 651 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 SLC35G6P0C7Q6 338 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 CDH1P12830 882 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 MMP11P24347 488 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 SKP1P63208 163 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 NFKB2Q00653 900 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 COL9A2Q14055 689 aaPredicted RBP9.97□□□□□ -0.81
MCF2L-216ENST00000439475 SLMAPQ14BN4 828 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 TGFBIQ15582 683 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 UAP1Q16222 522 aaPredicted RBP9.97□□□□□ -0.81
MCF2L-216ENST00000439475 RBBP7Q16576 425 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 HKDC1Q2TB90 917 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 CDKL4Q5MAI5 379 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 IRAK1BP1Q5VVH5 260 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 NIPAL1Q6NVV3 410 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 ASPGQ86U10 573 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 THOC6Q86W42 341 aaKnown RBP9.97□□□□□ -0.81
MCF2L-216ENST00000439475 GPSM1Q86YR5 675 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 PLD3Q8IV08 490 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 METTL27Q8N6F8 245 aaPredicted RBP9.97□□□□□ -0.81
MCF2L-216ENST00000439475 MFSD9Q8NBP5 474 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 CLEC1AQ8NC01 280 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 NOA1Q8NC60 698 aaKnown RBP9.97□□□□□ -0.81
MCF2L-216ENST00000439475 ABHD11Q8NFV4 315 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 STAG3L4Q8TBR4 150 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 STT3BQ8TCJ2 826 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 ANKRD49Q8WVL7 239 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.97□□□□□ -0.81
MCF2L-216ENST00000439475 SLC13A3Q8WWT9 602 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 AIF1LQ9BQI0 150 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 MCMBPQ9BTE3 642 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 DRC3Q9H069 523 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 CAB39LQ9H9S4 337 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 ANKHQ9HCJ1 492 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 SLC22A11Q9NSA0 550 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 WWOXQ9NZC7 414 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 SLC22A14Q9Y267 594 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 ACOT9Q9Y305 439 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 ZNF451Q9Y4E5 1061 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 PCDHGA9Q9Y5G4 932 aaKnown RBP9.97□□□□□ -0.81
MCF2L-216ENST00000439475 CELSR3Q9NYQ7 3312 aa9.97□□□□□ -0.81
MCF2L-216ENST00000439475 COL6A6A6NMZ7 2263 aa9.96□□□□□ -0.81
MCF2L-216ENST00000439475 FER1L5A0AVI2 2057 aa9.96□□□□□ -0.81
MCF2L-216ENST00000439475 TRBC2A0A5B9 178 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 FEZF1A0PJY2 475 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 VSTM2BA6NLU5 285 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 AGPSO00116 658 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 PCDH17O14917 1159 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 PHGDHO43175 533 aaKnown RBP9.96□□□□□ -0.82
MCF2L-216ENST00000439475 NRP2O60462 931 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 IPO13O94829 963 aaKnown RBP9.96□□□□□ -0.82
MCF2L-216ENST00000439475 WDR47O94967 919 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 C1QAP02745 245 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 INHBAP08476 426 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 ZGLP1P0C6A0 271 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 CD1DP15813 335 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 GNAZP19086 355 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 SLC26A3P40879 764 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 PGDP52209 483 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 EMP2P54851 167 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 RGS1Q08116 209 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 KLRB1Q12918 225 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 CHAF1BQ13112 559 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 PWP1Q13610 501 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 DSG2Q14126 1118 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 ZKSCAN8Q15776 578 aaPredicted RBP9.96□□□□□ -0.82
MCF2L-216ENST00000439475 PPP1R3AQ16821 1122 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 LGSNQ5TDP6 509 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 SULT1C3Q6IMI6 304 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 ASB18Q6ZVZ8 466 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 TAOK1Q7L7X3 1001 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 PRICKLE2Q7Z3G6 844 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 PTRH1Q86Y79 214 aaKnown RBP9.96□□□□□ -0.82
MCF2L-216ENST00000439475 TRPV3Q8NET8 790 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 OR4K1Q8NGD4 311 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 KIAA1191Q96A73 305 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 RHBDF1Q96CC6 855 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 MRRFQ96E11 262 aaKnown RBP9.96□□□□□ -0.82
MCF2L-216ENST00000439475 C10orf90Q96M02 699 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 SPSB2Q99619 263 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms