RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ZNF646O15015 1829 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 C7orf72A4D263 438 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 G3V2T6 193 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 CLIC1O00299 241 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 PRLP01236 227 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 KLK1P06870 262 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 ZNF8P17098 575 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 CCNA2P20248 432 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 SLC16A1P53985 500 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 ZNF554Q86TJ5 538 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 OR10Q1Q8NGQ4 319 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 LMLNQ96KR4 655 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 LMAN2LQ9H0V9 348 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 EQTNQ9NQ60 294 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 AIG1Q9NVV5 245 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 DUSP12Q9UNI6 340 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 MGAMO43451 1857 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 BOLA2-SMG1P6H3BVE0 249 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 OR10H2O60403 315 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 BCAS2O75934 225 aaPredicted RBP11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 ENTPD1P49961 510 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 DGKEP52429 567 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 RHDQ02161 417 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 PDCD4Q53EL6 469 aaKnown RBP11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 PIGGQ5H8A4 983 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 CTSL3PQ5NE16 218 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC5A11Q8WWX8 675 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 POP5Q969H6 163 aaKnown RBP11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 IL17FQ96PD4 163 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 CDCA3Q99618 268 aaPredicted RBP11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.21□□□□□ -0.622e-6■■■■□ 20.5
TRAPPC9-202ENST00000438773 TMED5Q9Y3A6 229 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 TMX2-CTNND1H3BSU7 103 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 KPNA4O00629 521 aaPredicted RBP11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC16A8O95907 504 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 FGF4P08620 206 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC35G6P0C7Q6 338 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 NTSR1P30989 418 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 CCR7P32248 378 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 RPS21P63220 83 aaKnown RBP11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 EOGTQ5NDL2 527 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 ARMC4Q5T2S8 1044 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 C6orf183Q5T699 404 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 KLHL35Q6PF15 583 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 ABRAXAS1Q6UWZ7 409 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 NRSN1Q8IZ57 195 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 TSTD1Q8NFU3 115 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 FAM110BQ8TC76 370 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 LRCH3Q96II8 777 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 RAB11FIP5Q9BXF6 653 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 C1QTNF1Q9BXJ1 281 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 KRT84Q9NSB2 600 aa11.21□□□□□ -0.62
TRAPPC9-202ENST00000438773 PTPRFP10586 1907 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC16A5O15375 505 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 VEGFDO43915 354 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 PDYNP01213 254 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 RPS17P08708 135 aaKnown RBP11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 ITGA2P17301 1181 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 CR2P20023 1033 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 BLVRAP53004 296 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 KCNC3Q14003 757 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 NFE2L1Q14494 772 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 SPIN4Q56A73 249 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 UBE2J2Q8N2K1 259 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZCCHC10Q8TBK6 192 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 RHBDF1Q96CC6 855 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 CMTM7Q96FZ5 175 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC12A9Q9BXP2 914 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 TMEM245Q9H330 911 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 AKAP7Q9P0M2 348 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 GMPR2Q9P2T1 348 aaKnown RBP11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 KLHL3Q9UH77 587 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 INTS6Q9UL03 887 aaKnown RBP11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 RAB26Q9ULW5 256 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 HNRNPCL2B2RXH8 293 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 SERPINB7O75635 380 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 STATHP02808 62 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 IFNA16P05015 189 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 CDH1P12830 882 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 EMP3P54852 163 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 SPIBQ01892 262 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 DOC2AQ14183 400 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 PCBP2Q15366 365 aaKnown RBP eCLIP11.2□□□□□ -0.627e-7■■■■■ 29
TRAPPC9-202ENST00000438773 SFRP1Q8N474 314 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 TSPEARQ8WU66 669 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 HLA-CQ95604 372 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 ISL2Q96A47 359 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 CLIP3Q96DZ5 547 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC30A3Q99726 388 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 C3orf14Q9HBI5 128 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZNF232Q9UNY5 417 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 OR1A2Q9Y585 309 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 CEPT1Q9Y6K0 416 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 DNAH12Q6ZR08 3092 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 A0A1W2PRB8 838 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 PLOD2O00469 737 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 BCKDHAP12694 445 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 HOXA9P31269 272 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 KCNC1P48547 511 aa11.2□□□□□ -0.62
TRAPPC9-202ENST00000438773 FBXW4P57775 412 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms