RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 PDHA2P29803 388 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 CAPGP40121 348 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 SOX3P41225 446 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 PRKG2Q13237 762 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 FAM133BQ5BKY9 247 aaKnown RBP2.75□□□□□ -1.97
CLK1-204ENST00000432425 BMP2KLQ5H9B9 411 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 LCLAT1Q6UWP7 414 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 FCRLAQ7L513 359 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 SLC39A11Q8N1S5 342 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 FAM89BQ8N5H3 189 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 POM121L12Q8N7R1 296 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 TC2NQ8N9U0 490 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 C17orf47Q8NEP4 570 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 C9orf43Q8TAL5 461 aaPredicted RBP2.75□□□□□ -1.97
CLK1-204ENST00000432425 C11orf45Q8TAV5 145 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 METTL21AQ8WXB1 218 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 ATXN7L3BQ96GX2 97 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 RPP25Q9BUL9 199 aaKnown RBP2.75□□□□□ -1.97
CLK1-204ENST00000432425 AP1M1Q9BXS5 423 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 MTHFD2LQ9H903 347 aaPredicted RBP2.75□□□□□ -1.97
CLK1-204ENST00000432425 GPN1Q9HCN4 374 aaPredicted RBP2.75□□□□□ -1.97
CLK1-204ENST00000432425 ANAPC2Q9UJX6 822 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 RARRES3Q9UL19 164 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 ADAMTS9Q9P2N4 1935 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 EDDM13A0A1B0GTR0 161 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 A0A1W2PPM1 405 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 SNX3O60493 162 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 PLOD3O60568 738 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 CEACAM4O75871 244 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 CD22P20273 847 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 EEF1B2P24534 225 aaKnown RBP2.74□□□□□ -1.97
CLK1-204ENST00000432425 OAS2P29728 719 aaKnown RBP2.74□□□□□ -1.97
CLK1-204ENST00000432425 OXTRP30559 389 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 CCR3P51677 355 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 WASHC5Q12768 1159 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 PTPRCAPQ14761 206 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 NPTX1Q15818 432 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 VWC2Q2TAL6 325 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 LETM2Q2VYF4 491 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 GPR33Q49SQ1 333 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 HIGD2BQ4VC39 106 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 DNAJC21Q5F1R6 531 aaKnown RBP2.74□□□□□ -1.97
CLK1-204ENST00000432425 SLC25A30Q5SVS4 291 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 GARNL3Q5VVW2 1013 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 GDPGP1Q6ZNW5 385 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 ZBTB49Q6ZSB9 765 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 CHPT1Q8WUD6 406 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 SNX21Q969T3 373 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 CCDC47Q96A33 483 aaKnown RBP2.74□□□□□ -1.97
CLK1-204ENST00000432425 ZMAT2Q96NC0 199 aaKnown RBP2.74□□□□□ -1.97
CLK1-204ENST00000432425 MAP3K3Q99759 626 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 PUS3Q9BZE2 481 aaKnown RBP2.74□□□□□ -1.97
CLK1-204ENST00000432425 ZCCHC17Q9NP64 241 aaKnown RBP2.74□□□□□ -1.97
CLK1-204ENST00000432425 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.74□□□□□ -1.97
CLK1-204ENST00000432425 LNPEPQ9UIQ6 1025 aa2.74□□□□□ -1.97
CLK1-204ENST00000432425 GON4LQ3T8J9 2241 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 A8MXK9 166 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 RPS6KA5O75582 802 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 ACSL3O95573 720 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 STARD3NLO95772 234 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 AZU1P20160 251 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 CD27P26842 260 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 CETN2P41208 172 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 OR3A2P47893 321 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 SNTB1Q13884 538 aaKnown RBP2.73□□□□□ -1.97
CLK1-204ENST00000432425 OPCMLQ14982 345 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 FAM189A2Q15884 450 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 KRT39Q6A163 491 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 CTR9Q6PD62 1173 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 ENOSF1Q7L5Y1 443 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 CENPVQ7Z7K6 275 aaPredicted RBP2.73□□□□□ -1.97
CLK1-204ENST00000432425 ZFAND4Q86XD8 727 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 LINC00612Q8N6U2 182 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 RASGEF1AQ8N9B8 481 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 POMGNT2Q8NAT1 580 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 KCNE4Q8WWG9 221 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 PIK3R3Q92569 461 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 CNRIP1Q96F85 164 aaPredicted RBP2.73□□□□□ -1.97
CLK1-204ENST00000432425 C2orf48Q96LS8 159 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 FEVQ99581 238 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 CPNE1Q99829 537 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 OVOL2Q9BRP0 275 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 GSN-AS1Q9NRJ2 163 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 TRPV2Q9Y5S1 764 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 TRBV4-1A0A0J9YWV2 114 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 CASTOR2A6NHX0 329 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 ACOD1A6NK06 481 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 C19orf81C9J6K1 198 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 CLDN4O14493 209 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 PTGESO14684 152 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 HMMRO75330 724 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 ATP5BP06576 529 aaKnown RBP2.73□□□□□ -1.97
CLK1-204ENST00000432425 CSN3P07498 182 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 EPCAMP16422 314 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 ITIH1P19827 911 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 PIK3R1P27986 724 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 CSE1LP55060 971 aaKnown RBP2.73□□□□□ -1.97
CLK1-204ENST00000432425 IRX3P78415 501 aaPredicted RBP2.73□□□□□ -1.97
CLK1-204ENST00000432425 DHODHQ02127 395 aa2.73□□□□□ -1.97
CLK1-204ENST00000432425 PKN2Q16513 984 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms