RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 CDC14AQ9UNH5 594 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 B3GNT3Q9Y2A9 372 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 CSAG2Q9Y5P2 127 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 CPAMD8Q8IZJ3 1885 aa17.5■□□□□ 0.39
PSPC1-202ENST00000427943 IGLV3-12A0A075B6K2 115 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 CCDC188H7C350 402 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 MAP2K7O14733 419 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 PRPF4O43172 522 aaKnown RBP eCLIP17.49■□□□□ 0.39
PSPC1-202ENST00000427943 KLHL41O60662 606 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 SEC31AO94979 1220 aaKnown RBP17.49■□□□□ 0.39
PSPC1-202ENST00000427943 TSPAN12O95859 305 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 ANXA5P08758 320 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 ACPPP15309 386 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 PAFAH1B1P43034 410 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 MRPS25P82663 173 aaKnown RBP17.49■□□□□ 0.39
PSPC1-202ENST00000427943 Q0VFX4 171 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 NAE1Q13564 534 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 FASTKD3Q14CZ7 662 aaKnown RBP17.49■□□□□ 0.39
PSPC1-202ENST00000427943 GARNL3Q5VVW2 1013 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 STEAP4Q687X5 459 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 FAAH2Q6GMR7 532 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 GALNT7Q86SF2 657 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 LAPTM4BQ86VI4 370 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 ZADH2Q8N4Q0 377 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 FAM26EQ8N5C1 309 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 TM9SF4Q92544 642 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 OLFM1Q99784 485 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 ZNF160Q9HCG1 818 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 TMEM184CQ9NVA4 438 aa17.49■□□□□ 0.39
PSPC1-202ENST00000427943 USP9XQ93008 2570 aaPredicted RBP17.49■□□□□ 0.39
PSPC1-202ENST00000427943 EFCAB8A8MWE9 144 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 IDSB3KWA1 339 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 TP73O15350 636 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 SLC16A5O15375 505 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 FDXRP22570 491 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 IL2P60568 153 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 MAT1AQ00266 395 aaKnown RBP17.48■□□□□ 0.39
PSPC1-202ENST00000427943 RELAQ04206 551 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 EEF1A2Q05639 463 aaKnown RBP17.48■□□□□ 0.39
PSPC1-202ENST00000427943 PDIA2Q13087 525 aaKnown RBP17.48■□□□□ 0.39
PSPC1-202ENST00000427943 IRAK1BP1Q5VVH5 260 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 FAM45BPQ6NSW5 357 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 IGFL3Q6UXB1 125 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 PRSS41Q7RTY9 318 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 VN1R4Q7Z5H5 301 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 C17orf64Q86WR6 236 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 IQCKQ8N0W5 287 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 FAM45AQ8TCE6 357 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 LRRC39Q96DD0 335 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 C19orf60Q96EN9 201 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 THOC3Q96J01 351 aaKnown RBP17.48■□□□□ 0.39
PSPC1-202ENST00000427943 VPS50Q96JG6 964 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 KRT12Q99456 494 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 MACROD1Q9BQ69 325 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 C14orf105Q9NVL8 296 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 PSAT1Q9Y617 370 aa17.48■□□□□ 0.39
PSPC1-202ENST00000427943 FEZF1A0PJY2 475 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 TXNDC9O14530 226 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 HPP00738 406 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 HIST1H2AGP0C0S8 130 aaPredicted RBP17.47■□□□□ 0.39
PSPC1-202ENST00000427943 CDH1P12830 882 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 HIST1H2ADP20671 130 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 SLC26A3P40879 764 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 RPL21P46778 160 aaKnown RBP17.47■□□□□ 0.39
PSPC1-202ENST00000427943 EMP2P54851 167 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 RPS15AP62244 130 aaKnown RBP17.47■□□□□ 0.39
PSPC1-202ENST00000427943 CSNK1G2P78368 415 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 MRPL49Q13405 166 aaKnown RBP17.47■□□□□ 0.39
PSPC1-202ENST00000427943 NDUFA9Q16795 377 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 ZC3H7AQ8IWR0 971 aaKnown RBP17.47■□□□□ 0.39
PSPC1-202ENST00000427943 FBXO36Q8NEA4 188 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 OR9A4Q8NGU2 314 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 ZCCHC10Q8TBK6 192 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 PYCR2Q96C36 320 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 SNRNP40Q96DI7 357 aaKnown RBP17.47■□□□□ 0.39
PSPC1-202ENST00000427943 HIST1H2AHQ96KK5 128 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 HIST1H2AJQ99878 128 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 H2AFJQ9BTM1 129 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 SGPP1Q9BX95 441 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 LHPPQ9H008 270 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 ARL15Q9NXU5 204 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 ZFATQ9P243 1243 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 IKZF3Q9UKT9 509 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 CORO1CQ9ULV4 474 aaPredicted RBP17.47■□□□□ 0.39
PSPC1-202ENST00000427943 SNX24Q9Y343 169 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 CNTRLQ7Z7A1 2325 aa17.47■□□□□ 0.39
PSPC1-202ENST00000427943 PABPN1LA6NDY0 278 aaKnown RBP17.46■□□□□ 0.39
PSPC1-202ENST00000427943 TCP11X1B4DZS4 312 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 GUCA1CO95843 209 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 HEXBP07686 556 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 COX6A1P12074 109 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 IL1RNP18510 177 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 SAT1P21673 171 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 CCND1P24385 295 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 HRH2P25021 359 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 BCL6P41182 706 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 EFNA3P52797 238 aa17.46■□□□□ 0.39
PSPC1-202ENST00000427943 MEF2AQ02078 507 aaPredicted RBP17.46■□□□□ 0.39
PSPC1-202ENST00000427943 ZXDCQ2QGD7 858 aaPredicted RBP17.46■□□□□ 0.39
PSPC1-202ENST00000427943 AGAP7PQ5VUJ5 663 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms