RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 CYP4A22Q5TCH4 519 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 GFI1BQ5VTD9 330 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 SNX30Q5VWJ9 437 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 METTL7BQ6UX53 244 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 MARK2Q7KZI7 788 aaKnown RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 LRRC8DQ7L1W4 858 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 R3HCC1LQ7Z5L2 792 aaKnown RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 ADGRG6Q86SQ4 1221 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 SETD3Q86TU7 594 aaPredicted RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 NR2C2APQ86WQ0 139 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 ARMC8Q8IUR7 673 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 CTAGE3PQ8IX95 158 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 KIRREL3Q8IZU9 778 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 PAQR4Q8N4S7 273 aaPredicted RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 SLC4A11Q8NBS3 891 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 CATSPER1Q8NEC5 780 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 FAM110DQ8TAY7 271 aaPredicted RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 ELP5Q8TE02 316 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 DEPDC1BQ8WUY9 529 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 CFAP36Q96G28 342 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 FAM111AQ96PZ2 611 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 TCHPQ9BT92 498 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 SF3B5Q9BWJ5 86 aaKnown RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 CALN1Q9BXU9 219 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 GLIS2Q9BZE0 524 aaPredicted RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 TRIM4Q9C037 500 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 SDCBP2Q9H190 292 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 DENND2DQ9H6A0 471 aaPredicted RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 ZWILCHQ9H900 591 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 RPF1Q9H9Y2 349 aaKnown RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 EIF2B3Q9NR50 452 aaKnown RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 HACD3Q9P035 362 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 TXNDC16Q9P2K2 825 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 RCOR3Q9P2K3 495 aaPredicted RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 MORF4L1Q9UBU8 362 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 WNT16Q9UBV4 365 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 VPS28Q9UK41 221 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 CPSF3Q9UKF6 684 aaKnown RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 ITGA11Q9UKX5 1188 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 KIAA1257Q9ULG3 409 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 GRID1Q9ULK0 1009 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 HBS1LQ9Y450 684 aaKnown RBP4.93□□□□□ -1.62
LINC00458-202ENST00000427299 TEX264Q9Y6I9 313 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 MYLKQ15746 1914 aa4.93□□□□□ -1.62
LINC00458-202ENST00000427299 COL1A2P08123 1366 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 IGKV6D-21A0A0A0MT36 114 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 BCLAF3A2AJT9 711 aaKnown RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 SH2D7A6NKC9 451 aaPredicted RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 KPNA7A9QM74 516 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 TRIM49D1C9J1S8 452 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 F8VP50 259 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 GOLGA8MH3BSY2 632 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 SLC22A2O15244 555 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 KCNN4O15554 427 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 FAM189A1O60320 539 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 TM7SF2O76062 418 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 STBD1O95210 358 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 APOA4P06727 396 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 HOXC6P09630 235 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 ZSCAN5DPP0CG00 497 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 MCF2P10911 925 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 MLNP12872 115 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 PKMP14618 531 aaKnown RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 AOC1P19801 751 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 BGNP21810 368 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 SP100P23497 879 aaPredicted RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 PRDX6P30041 224 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 MIPP30301 263 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 SDC4P31431 198 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 RPL22P35268 128 aaKnown RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 ELK3P41970 407 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 RFX2P48378 723 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 HSPA13P48723 471 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 ENTPD1P49961 510 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 SERPINB8P50452 374 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 RPS6KA3P51812 740 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 KRTAP10-5P60370 271 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 ARF3P61204 181 aaPredicted RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 ARF1P84077 181 aaKnown RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 TFAMQ00059 246 aaKnown RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 OGDHQ02218 1023 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 SP4Q02446 784 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 INCA1Q0VD86 236 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 DPYSL3Q14195 570 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 DCAF4L1Q3SXM0 396 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 KBTBD12Q3ZCT8 623 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 TEX44Q53QW1 395 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 BOLA3Q53S33 107 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 C2CD6Q53TS8 623 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 FSCBQ5H9T9 825 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 EFHC1Q5JVL4 640 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 C6orf10Q5SRN2 563 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 ATF7IP2Q5U623 682 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 C1orf146Q5VVC0 180 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 ANKRD22Q5VYY1 191 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 TMEM154Q6P9G4 183 aa4.92□□□□□ -1.62
LINC00458-202ENST00000427299 H1FNTQ75WM6 255 aaPredicted RBP4.92□□□□□ -1.62
LINC00458-202ENST00000427299 TRILQ7L0X0 811 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms