RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 NRBF2Q96F24 287 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 MED8Q96G25 268 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 PANX1Q96RD7 426 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 LHPPQ9H008 270 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 PLGRKTQ9HBL7 147 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 MARK1Q9P0L2 795 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 ORC6Q9Y5N6 252 aa10.33□□□□□ -0.76
CUX1-205ENST00000425244 KCNE1BA0A087WTH5 132 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 hCG_2039718K7EN88 272 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 RECQL5O94762 991 aaPredicted RBP10.32□□□□□ -0.76
CUX1-205ENST00000425244 RETP07949 1114 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 MAPK1P28482 360 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 WASP42768 502 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 ST8SIA6P61647 398 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 IRF8Q02556 426 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 ANKDD1AQ495B1 522 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 FNDC3BQ53EP0 1204 aaKnown RBP10.32□□□□□ -0.76
CUX1-205ENST00000425244 C6orf141Q5SZD1 244 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 NOXRED1Q6NXP6 359 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 ZNF621Q6ZSS3 439 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 Q7L0L9 218 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 ZC3H7AQ8IWR0 971 aaKnown RBP10.32□□□□□ -0.76
CUX1-205ENST00000425244 TCAIMQ8N3R3 496 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 OR5K1Q8NHB7 308 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 VOPP1Q96AW1 172 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 ECHDC3Q96DC8 303 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 CMTM7Q96FZ5 175 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 PYURFQ96I23 114 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 TRMT61BQ9BVS5 477 aaKnown RBP10.32□□□□□ -0.76
CUX1-205ENST00000425244 REXO4Q9GZR2 422 aaKnown RBP10.32□□□□□ -0.76
CUX1-205ENST00000425244 PRO3102Q9H379 93 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 VNN3Q9NY84 501 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 C3orf18Q9UK00 162 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 LOC100130705A0A1B0GUX0 176 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 EVPLLA8MZ36 301 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 NUAK1O60285 661 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 ABCB7O75027 752 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 POP4O95707 220 aaKnown RBP10.32□□□□□ -0.76
CUX1-205ENST00000425244 CPNE6O95741 557 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 TFPTP0C1Z6 253 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 CISD3P0C7P0 127 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 COX7A2P14406 83 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 CCNA2P20248 432 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 GJA4P35212 333 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 IL5RAQ01344 420 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 ARSIQ5FYB1 569 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 XKR6Q5GH73 641 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 LRIF1Q5T3J3 769 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 Q6ZVL8 140 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 ZNF551Q7Z340 670 aaPredicted RBP10.32□□□□□ -0.76
CUX1-205ENST00000425244 CALHM3Q86XJ0 350 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 GALNT13Q8IUC8 556 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 ZDHHC21Q8IVQ6 265 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 TERB1Q8NA31 727 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 OR2A12Q8NGT7 310 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 NELL1Q92832 810 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 PPP1R14BQ96C90 147 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 REXO5Q96IC2 774 aaKnown RBP10.32□□□□□ -0.76
CUX1-205ENST00000425244 MCCC1Q96RQ3 725 aaPredicted RBP10.32□□□□□ -0.76
CUX1-205ENST00000425244 BARD1Q99728 777 aaKnown RBP10.32□□□□□ -0.76
CUX1-205ENST00000425244 DPH2Q9BQC3 489 aaPredicted RBP10.32□□□□□ -0.76
CUX1-205ENST00000425244 RIBC2Q9H4K1 309 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 PCDH12Q9NPG4 1184 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 AASSQ9UDR5 926 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 AP3M1Q9Y2T2 418 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 MYO10Q9HD67 2058 aa10.32□□□□□ -0.76
CUX1-205ENST00000425244 TMEM202A6NGA9 273 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 FPGTO14772 594 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 HOXC11O43248 304 aaPredicted RBP10.31□□□□□ -0.76
CUX1-205ENST00000425244 MAN1A2O60476 641 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 FTH1P02794 183 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 AMD1P17707 334 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 ENGP17813 658 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 ETV3P41162 512 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 SLC6A12P48065 614 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 HNMTP50135 292 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 PTPN5P54829 565 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 EPS8Q12929 822 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 TSTA3Q13630 321 aaPredicted RBP10.31□□□□□ -0.76
CUX1-205ENST00000425244 SIM2Q14190 667 aaPredicted RBP10.31□□□□□ -0.76
CUX1-205ENST00000425244 SYTL3Q4VX76 610 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 RBM48Q5RL73 367 aaKnown RBP10.31□□□□□ -0.76
CUX1-205ENST00000425244 XAF1Q6GPH4 301 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 DHRS4L2Q6PKH6 230 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 RNF165Q6ZSG1 346 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 HSD11B1LQ7Z5J1 315 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 ETFBKMTQ8IXQ9 262 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 SPARTQ8N0X7 666 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 CNIH3Q8TBE1 160 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 SNRNP27Q8WVK2 155 aaKnown RBP10.31□□□□□ -0.76
CUX1-205ENST00000425244 HDAC2Q92769 488 aaKnown RBP10.31□□□□□ -0.76
CUX1-205ENST00000425244 GAS2L1Q99501 681 aaPredicted RBP10.31□□□□□ -0.76
CUX1-205ENST00000425244 ABCG2Q9UNQ0 655 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 SH3GLB1Q9Y371 365 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 SNX5Q9Y5X3 404 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 CFAP99D6REC4 459 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 BCKDKO14874 412 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 WNT9AO14904 365 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 XPNPEP2O43895 674 aa10.31□□□□□ -0.76
CUX1-205ENST00000425244 LEFTY1O75610 366 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms