RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 ANXA8L1Q5VT79 327 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 ZDHHC20Q5W0Z9 365 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 FAM151BQ6UXP7 276 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 RNF19BQ6ZMZ0 732 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 ANKS3Q6ZW76 656 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 CCDC190Q86UF4 302 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 FAM124AQ86V42 546 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 NLRP8Q86W28 1048 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 DCAF4L2Q8NA75 395 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 CLHC1Q8NHS4 586 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 CXorf40BQ96DE9 158 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 ZNF486Q96H40 463 aaPredicted RBP14.74□□□□□ -0.05
C9orf3-204ENST00000424143 TSSK3Q96PN8 268 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 PANX1Q96RD7 426 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 SEPT5Q99719 369 aaPredicted RBP14.74□□□□□ -0.05
C9orf3-204ENST00000424143 BOCQ9BWV1 1114 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 REXO4Q9GZR2 422 aaKnown RBP14.74□□□□□ -0.05
C9orf3-204ENST00000424143 C3orf14Q9HBI5 128 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 ABCB10Q9NRK6 738 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 SIRT5Q9NXA8 310 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 SLCO3A1Q9UIG8 710 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 CRLS1Q9UJA2 301 aa14.74□□□□□ -0.05
C9orf3-204ENST00000424143 ARRDC5A6NEK1 342 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 SCAMP3O14828 347 aaKnown RBP14.73□□□□□ -0.05
C9orf3-204ENST00000424143 SUV39H1O43463 412 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 APOA1P02647 267 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 TRAPPC2P0DI81 140 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 TRAPPC2BP0DI82 140 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 BPIP17213 487 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 GADD45AP24522 165 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 EPHA2P29317 976 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 CORO1AP31146 461 aaKnown RBP14.73□□□□□ -0.05
C9orf3-204ENST00000424143 PIK3CBP42338 1070 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 RBBP4Q09028 425 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 TWF1Q12792 350 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 SLC14A1Q13336 389 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 ARHGEF7Q14155 803 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 CPSF6Q16630 551 aaKnown RBP eCLIP14.73□□□□□ -0.05
C9orf3-204ENST00000424143 GDPGP1Q6ZNW5 385 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 SNX29P2Q8IUI4 249 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 PARP16Q8N5Y8 322 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 OR4C15Q8NGM1 316 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 ASB11Q8WXH4 323 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 C11orf24Q96F05 449 aaPredicted RBP14.73□□□□□ -0.05
C9orf3-204ENST00000424143 ALG14Q96F25 216 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 APIPQ96GX9 242 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 SNX18Q96RF0 628 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 KLF16Q9BXK1 252 aaPredicted RBP14.73□□□□□ -0.05
C9orf3-204ENST00000424143 THSD1Q9NS62 852 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 DNAJC11Q9NVH1 559 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 TMEM161AQ9NX61 479 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 ARL15Q9NXU5 204 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 CFL2Q9Y281 166 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 PRG3Q9Y2Y8 225 aaPredicted RBP14.73□□□□□ -0.05
C9orf3-204ENST00000424143 PPIL1Q9Y3C6 166 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 PCDHGA2Q9Y5H1 932 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 LYVE1Q9Y5Y7 322 aa14.73□□□□□ -0.05
C9orf3-204ENST00000424143 FAM172BPA6NC97 362 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 EFCAB10A6NFE3 127 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 CENPBD1B2RD01 187 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 GFYI3L273 518 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 hCG_2039718K7EN88 272 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 KPNA5O15131 536 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 COCHO43405 550 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 TBX1O43435 398 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 ATF6P18850 670 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 AOAHP28039 575 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 TIE1P35590 1138 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 SOX6P35712 828 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 DUSP4Q13115 394 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 CHRNA6Q15825 494 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 COLEC12Q5KU26 742 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 PLEKHS1Q5SXH7 462 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 AGAP6Q5VW22 663 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 MFSD14CQ5VZR4 134 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 CCSAPQ6IQ19 270 aaPredicted RBP14.72□□□□□ -0.05
C9orf3-204ENST00000424143 VTCN1Q7Z7D3 282 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 ANKRD46Q86W74 232 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 METTL4Q8N3J2 472 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 C2orf69Q8N8R5 385 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 VPS37AQ8NEZ2 397 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 IL17RDQ8NFM7 739 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 ZNF675Q8TD23 568 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 COQ8BQ96D53 544 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 AGAP4Q96P64 663 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 CLSTN3Q9BQT9 956 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 OR2B2Q9GZK3 357 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 TPT1P8Q9HAU6 139 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 BRF2Q9HAW0 419 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 SPATA6Q9NWH7 488 aaPredicted RBP14.72□□□□□ -0.05
C9orf3-204ENST00000424143 CRNNQ9UBG3 495 aaPredicted RBP14.72□□□□□ -0.05
C9orf3-204ENST00000424143 PCDHGB6Q9Y5F9 930 aa14.72□□□□□ -0.05
C9orf3-204ENST00000424143 C1orf226A1L170 272 aa14.71□□□□□ -0.05
C9orf3-204ENST00000424143 SEPT4O43236 478 aa14.71□□□□□ -0.05
C9orf3-204ENST00000424143 HIST1H2AGP0C0S8 130 aaPredicted RBP14.71□□□□□ -0.05
C9orf3-204ENST00000424143 PIPP12273 146 aaPredicted RBP14.71□□□□□ -0.05
C9orf3-204ENST00000424143 ITGA2P17301 1181 aa14.71□□□□□ -0.05
C9orf3-204ENST00000424143 HIST1H2ADP20671 130 aa14.71□□□□□ -0.05
C9orf3-204ENST00000424143 CA5AP35218 305 aa14.71□□□□□ -0.05
C9orf3-204ENST00000424143 SLC19A1P41440 591 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms