RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 TRA2AQ13595 282 aaKnown RBP eCLIP3.21□□□□□ -1.9
LINC00397-201ENST00000422074 IL11RAQ14626 422 aa3.21□□□□□ -1.9
LINC00397-201ENST00000422074 NPTX1Q15818 432 aa3.21□□□□□ -1.9
LINC00397-201ENST00000422074 VWC2Q2TAL6 325 aa3.21□□□□□ -1.9
LINC00397-201ENST00000422074 KRT80Q6KB66 452 aa3.21□□□□□ -1.9
LINC00397-201ENST00000422074 SLC47A2Q86VL8 602 aa3.21□□□□□ -1.9
LINC00397-201ENST00000422074 METTL4Q8N3J2 472 aa3.21□□□□□ -1.9
LINC00397-201ENST00000422074 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.21□□□□□ -1.9
LINC00397-201ENST00000422074 CCDC191Q8NCU4 936 aa3.21□□□□□ -1.9
LINC00397-201ENST00000422074 C9orf43Q8TAL5 461 aaPredicted RBP3.21□□□□□ -1.9
LINC00397-201ENST00000422074 PIK3R3Q92569 461 aa3.21□□□□□ -1.9
LINC00397-201ENST00000422074 CFDP1Q9UEE9 299 aaPredicted RBP3.21□□□□□ -1.9
LINC00397-201ENST00000422074 PRDM4Q9UKN5 801 aa3.21□□□□□ -1.9
LINC00397-201ENST00000422074 ELF5Q9UKW6 265 aaPredicted RBP3.21□□□□□ -1.9
LINC00397-201ENST00000422074 GON4LQ3T8J9 2241 aa3.21□□□□□ -1.9
LINC00397-201ENST00000422074 FPGTO14772 594 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 GGPS1O95749 300 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 ATP1B1P05026 303 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 MYBL1P10243 752 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 PRKAR1AP10644 381 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 CD22P20273 847 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 IL11P20809 199 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 IL4RP24394 825 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 ELAVL4P26378 380 aaKnown RBP3.2□□□□□ -1.9
LINC00397-201ENST00000422074 CCR3P51677 355 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 POLR2LP62875 67 aaKnown RBP3.2□□□□□ -1.9
LINC00397-201ENST00000422074 TRAP1Q12931 704 aaKnown RBP3.2□□□□□ -1.9
LINC00397-201ENST00000422074 SGCGQ13326 291 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 SNTB1Q13884 538 aaKnown RBP3.2□□□□□ -1.9
LINC00397-201ENST00000422074 TRIM29Q14134 588 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 FAM182AQ5T1J6 154 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 CAMKMTQ7Z624 323 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 ABHD12Q8N2K0 398 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 TC2NQ8N9U0 490 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 TEKT4Q8WW24 435 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 MUS81Q96NY9 551 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 NYXQ9GZU5 481 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 B3GAT2Q9NPZ5 323 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 THAP10Q9P2Z0 257 aaPredicted RBP3.2□□□□□ -1.9
LINC00397-201ENST00000422074 NFKBIL1Q9UBC1 381 aaPredicted RBP3.2□□□□□ -1.9
LINC00397-201ENST00000422074 SLC24A2Q9UI40 661 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 RARRES3Q9UL19 164 aa3.2□□□□□ -1.9
LINC00397-201ENST00000422074 IGSF1Q8N6C5 1336 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 IGHV4-30-2A0A087WSY4 118 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 ACOD1A6NK06 481 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 K7EQD1 137 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 DIAPH2O60879 1101 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 HPRP00739 348 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 CD27P26842 260 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 PDHA2P29803 388 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 LBX1P52954 281 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 CSE1LP55060 971 aaKnown RBP3.19□□□□□ -1.9
LINC00397-201ENST00000422074 ALCAMQ13740 583 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 TCP11X2Q5H9J9 407 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 SPECC1Q5M775 1068 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 ERMARDQ5T6L9 678 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 C3P1Q6ZMU1 363 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 FCRLAQ7L513 359 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 ZER1Q7Z7L7 766 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 RASGEF1AQ8N9B8 481 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 NOA1Q8NC60 698 aaKnown RBP3.19□□□□□ -1.9
LINC00397-201ENST00000422074 RMDN1Q96DB5 314 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 CNRIP1Q96F85 164 aaPredicted RBP3.19□□□□□ -1.9
LINC00397-201ENST00000422074 PGAP3Q96FM1 320 aaPredicted RBP3.19□□□□□ -1.9
LINC00397-201ENST00000422074 ATXN7L3BQ96GX2 97 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 PDLIM5Q96HC4 596 aaKnown RBP3.19□□□□□ -1.9
LINC00397-201ENST00000422074 RADILQ96JH8 1075 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 C2orf48Q96LS8 159 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 SERINC2Q96SA4 455 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 CDCA3Q99618 268 aaPredicted RBP3.19□□□□□ -1.9
LINC00397-201ENST00000422074 CPNE1Q99829 537 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 BAG1Q99933 345 aaPredicted RBP3.19□□□□□ -1.9
LINC00397-201ENST00000422074 AP1M1Q9BXS5 423 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 TUBB1Q9H4B7 451 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 GSN-AS1Q9NRJ2 163 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 PA2G4Q9UQ80 394 aaKnown RBP3.19□□□□□ -1.9
LINC00397-201ENST00000422074 ZNF510Q9Y2H8 683 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 RALGAPA1Q6GYQ0 2036 aa3.19□□□□□ -1.9
LINC00397-201ENST00000422074 TRAV24A0A0B4J272 114 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 EDDM13A0A1B0GTR0 161 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 TRBC2A0A5B9 178 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 TSPY2A6NKD2 308 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 G3V2L1 256 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 SNAP91O60641 907 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 DKC1O60832 514 aaKnown RBP eCLIP3.18□□□□□ -1.9
LINC00397-201ENST00000422074 TADA2AO75478 443 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 ATP6AP2O75787 350 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 PSMD10O75832 226 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 NXPH4O95158 308 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 HOXD4P09016 255 aaPredicted RBP3.18□□□□□ -1.9
LINC00397-201ENST00000422074 TSPY3P0CV98 308 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 TSPY8P0CW00 308 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 DNAH10OSP0CZ25 163 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 FOLR2P14207 255 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 CPT2P23786 658 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 EDNRAP25101 427 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 ZFP36L2P47974 494 aaKnown RBP3.18□□□□□ -1.9
LINC00397-201ENST00000422074 TSPY1Q01534 308 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 TMEM132DQ14C87 1099 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 PSMD6Q15008 389 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms