RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 IFNL1Q8IU54 200 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 TRIM48Q8IWZ4 208 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 DNAJC27Q9NZQ0 273 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 E7EQ34 232 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 SLC28A1O00337 649 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 STX16O14662 325 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 CLK3P49761 638 aaKnown RBP12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 DSC3Q14574 896 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 XKR7Q5GH72 579 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 UBE2UQ5VVX9 321 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 DPY19L3Q6ZPD9 716 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 SHFQ7M4L6 423 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 TEX26Q8N6G2 289 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 DNASE1L2Q92874 299 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZNF641Q96N77 438 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 TRIB3Q96RU7 358 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZNF556Q9HAH1 456 aa12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 PTBP2Q9UKA9 531 aaKnown RBP12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 INTS6Q9UL03 887 aaKnown RBP12.79□□□□□ -0.36
TNFRSF8-203ENST00000417814 LATO43561 262 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 HOXD8P13378 290 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 LIPAP38571 399 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 ISL1P61371 349 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 CAP1Q01518 475 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 TYSND1Q2T9J0 566 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 DGKKQ5KSL6 1271 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 AFMIDQ63HM1 303 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 TYW3Q6IPR3 259 aaKnown RBP12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 CFAP206Q8IYR0 622 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZNF683Q8IZ20 524 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 SLC5A8Q8N695 610 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZNF740Q8NDX6 193 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 WDR36Q8NI36 951 aaKnown RBP12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 C2orf49Q9BVC5 232 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 CEP44Q9C0F1 390 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 IL37Q9NZH6 218 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 SNX6Q9UNH7 406 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 GSAPA4D1B5 854 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 CCL16O15467 120 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 TLL1O43897 1013 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 SERPINA4P29622 427 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 KDELR2P33947 212 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 WASP42768 502 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 FKBP1BP68106 108 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 RPS26P11Q5JNZ5 115 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 CPTPQ5TA50 214 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 OTOP2Q7RTS6 562 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 NFKBIDQ8NI38 313 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 TMEM159Q96B96 161 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 PRR14Q9BWN1 585 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 KAT8Q9H7Z6 458 aaKnown RBP12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 B4GALT6Q9UBX8 382 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 CCDC88CQ9P219 2028 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 PCDHGA12O60330 932 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 KRT75O95678 551 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 PDHA2P29803 388 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 HSPB3Q12988 150 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 SF3B4Q15427 424 aaKnown RBP eCLIP12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 MRPL10Q7Z7H8 261 aaKnown RBP12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 CD99L2Q8TCZ2 262 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 STARD8Q92502 1023 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 ALPK1Q96QP1 1244 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 OSGEPL1Q9H4B0 414 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 PMF1-BGLAPU3KQ54 211 aa12.78□□□□□ -0.36
TNFRSF8-203ENST00000417814 SCELO95171 688 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 C6orf47O95873 294 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 EPOP01588 193 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 KRT8P05787 483 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 OR56A5P0C7T3 313 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 SPAM1P38567 509 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 SLC26A3P40879 764 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 RPS13P62277 151 aaKnown RBP12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 C2orf80Q0P641 193 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 COX20Q5RI15 118 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 GPRC6AQ5T6X5 926 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 DEPDC1Q5TB30 811 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 FRG2Q64ET8 278 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 C8orf82Q6P1X6 216 aaPredicted RBP12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 TMC5Q6UXY8 1006 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 ZNF551Q7Z340 670 aaPredicted RBP12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 TCAIMQ8N3R3 496 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 KLK6Q92876 244 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 FUBP3Q96I24 572 aaKnown RBP eCLIP12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 FRG2BQ96QU4 278 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 SLC52A3Q9NQ40 469 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 TMEM184CQ9NVA4 438 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.36
TNFRSF8-203ENST00000417814 TRBV23OR9-2A0A075B6M9 112 aa12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 A0A1B0GVC2 190 aa12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 A6NIN4 97 aa12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 DRGXA6NNA5 263 aa12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 INPPL1O15357 1258 aa12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 CH25HO95992 272 aa12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 HMGCLP35914 325 aa12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 ALDH6A1Q02252 535 aaKnown RBP12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 CAMK2GQ13555 558 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 TSTQ16762 297 aaKnown RBP12.77□□□□□ -0.37
TNFRSF8-203ENST00000417814 ARMCX4Q5H9R4 360 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms