RNA–Protein interactions for RNA: ENST00000416081.5

SSFA2-204, Transcript of Sperm-specific antigen 2, humanhuman

TSL 1 (best)

Gene SSFA2, Length 5,067 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-204ENST00000416081 CPSF6Q16630 551 aaKnown RBP eCLIP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 VN1R5Q7Z5H4 357 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 KIF18BQ86Y91 864 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 SYT12Q8IV01 421 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 SLC37A3Q8NCC5 494 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 AKAP1Q92667 903 aaKnown RBP eCLIP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 FEVQ99581 238 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 CCM2Q9BSQ5 444 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 ACTL8Q9H568 366 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 ZNF225Q9UK10 706 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 ZNF451Q9Y4E5 1061 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 NRXN2Q9P2S2 1712 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 SIP14410 1827 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 GPR182O15218 404 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 KLK8O60259 260 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 USP2O75604 605 aaPredicted RBP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 PRSS56P0CW18 603 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 CYP2A6P11509 494 aaPredicted RBP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 BCKDHAP12694 445 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 LPOP22079 712 aaPredicted RBP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 TBX4P57082 545 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 VLDLRP98155 873 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 IL18Q14116 193 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 EFR3AQ14156 821 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 TOR2AQ5JU69 321 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 PAMR1Q6UXH9 720 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 CASP12Q6UXS9 341 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 Q6ZPB1 254 aaPredicted RBP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 SAMD7Q7Z3H4 446 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 SERPINA11Q86U17 422 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 MICALL2Q8IY33 904 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 LGI4Q8N135 537 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 B3GNT7Q8NFL0 401 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 ZNF431Q8TF32 576 aaPredicted RBP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 INPP5KQ9BT40 448 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 SPON2Q9BUD6 331 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 POLR2J2Q9GZM3 115 aaKnown RBP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 MED28Q9H204 178 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 NLE1Q9NVX2 485 aaPredicted RBP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 PCDH10Q9P2E7 1040 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 STUB1Q9UNE7 303 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 POLHQ9Y253 713 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 HCN4Q9Y3Q4 1203 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 HS3ST4Q9Y661 456 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 B4DXG7 233 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 PROM1O43490 865 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 CA12O43570 354 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 ARHGEF15O94989 841 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 ALPPP05187 535 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 OR1E1P30953 314 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 HOXA9P31269 272 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 IL10RBQ08334 325 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 HNRNPA0Q13151 305 aaKnown RBP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 DSC3Q14574 896 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 VEPH1Q14D04 833 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 TTLL9Q3SXZ7 439 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 SETMARQ53H47 684 aaPredicted RBP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 RAB41Q5JT25 222 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 DGKKQ5KSL6 1271 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 PXDC1Q5TGL8 231 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 FAM205BPQ63HN1 556 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 LAIR1Q6GTX8 287 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 GALNT10Q86SR1 603 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 APOBEC3FQ8IUX4 373 aaKnown RBP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 RGL4Q8IZJ4 473 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 APH1BQ8WW43 257 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 AP2M1Q96CW1 435 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 MAGEB10Q96LZ2 347 aaPredicted RBP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 MND1Q9BWT6 205 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 GTPBP2Q9BX10 602 aaKnown RBP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 GABARAPL3Q9BY60 117 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 ATP13A1Q9HD20 1204 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 COQ3Q9NZJ6 369 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 AFF4Q9UHB7 1163 aaKnown RBP7.08□□□□□ -1.28
SSFA2-204ENST00000416081 MUTYHQ9UIF7 546 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 KIAA1217Q5T5P2 1943 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 DOCK5Q9H7D0 1870 aa7.08□□□□□ -1.28
SSFA2-204ENST00000416081 SH3D21A4FU49 640 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 HAS3O00219 553 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 MANBAO00462 879 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 SCAMP3O14828 347 aaKnown RBP7.07□□□□□ -1.28
SSFA2-204ENST00000416081 SHOXO15266 292 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 PLOD3O60568 738 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 MTRF1O75570 445 aaKnown RBP7.07□□□□□ -1.28
SSFA2-204ENST00000416081 IFNA7P01567 189 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 IFNA14P01570 189 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 MSL3P1P0C860 447 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 DGKAP23743 735 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 HOXA11P31270 313 aaPredicted RBP7.07□□□□□ -1.28
SSFA2-204ENST00000416081 RFX2P48378 723 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 PPIGQ13427 754 aaKnown RBP eCLIP7.07□□□□□ -1.282e-7■□□□□ 10.9
SSFA2-204ENST00000416081 TAF1AQ15573 450 aaPredicted RBP7.07□□□□□ -1.28
SSFA2-204ENST00000416081 DUOXA1Q1HG43 343 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 SLC35F1Q5T1Q4 408 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 FAM171A1Q5VUB5 890 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 OR4F3Q6IEY1 312 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 KCNJ9Q92806 393 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 MAPKAP1Q9BPZ7 522 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 SRRQ9GZT4 340 aa7.07□□□□□ -1.28
SSFA2-204ENST00000416081 ABCG8Q9H221 673 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms