RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-206ENST00000413725 B3GNT4Q9C0J1 378 aa12.61□□□□□ -0.39
SF1-206ENST00000413725 IPPKQ9H8X2 491 aa12.61□□□□□ -0.39
SF1-206ENST00000413725 ZNF446Q9NWS9 450 aa12.61□□□□□ -0.39
SF1-206ENST00000413725 PILRAQ9UKJ1 303 aa12.61□□□□□ -0.39
SF1-206ENST00000413725 CEP295Q9C0D2 2601 aa12.61□□□□□ -0.39
SF1-206ENST00000413725 TRBC2A0A5B9 178 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 PMS2P1A4D2B8 440 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 HMGB1P1B2RPK0 211 aaPredicted RBP12.6□□□□□ -0.39
SF1-206ENST00000413725 NRP2O60462 931 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 SRPX2O60687 465 aaPredicted RBP12.6□□□□□ -0.39
SF1-206ENST00000413725 UGDHO60701 494 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 OR2B3O76000 313 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 DXOO77932 396 aaKnown RBP12.6□□□□□ -0.39
SF1-206ENST00000413725 SUPT7LO94864 414 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 FGF5P12034 268 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 GABRA4P48169 554 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 CCNG1P51959 295 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 REEP5Q00765 189 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 CHIT1Q13231 466 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 PCLAFQ15004 111 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 TBCCQ15814 346 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 RBBP7Q16576 425 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.6□□□□□ -0.39
SF1-206ENST00000413725 TCTE1Q5JU00 501 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 CFAP157Q5JU67 520 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 ZNF678Q5SXM1 525 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 LIPMQ5VYY2 423 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 FBXO42Q6P3S6 717 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 C10orf107Q8IVU9 208 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 CCNYL1Q8N7R7 359 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 ZNF483Q8TF39 744 aaPredicted RBP12.6□□□□□ -0.39
SF1-206ENST00000413725 USP7Q93009 1102 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 ARL8AQ96BM9 186 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 WDR34Q96EX3 536 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 PRR11Q96HE9 360 aaPredicted RBP12.6□□□□□ -0.39
SF1-206ENST00000413725 SLC46A1Q96NT5 459 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 FCRL4Q96PJ5 515 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 CTRCQ99895 268 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 EFCAB11Q9BUY7 163 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 PITHD1Q9GZP4 211 aaPredicted RBP12.6□□□□□ -0.39
SF1-206ENST00000413725 NOL11Q9H8H0 719 aaKnown RBP12.6□□□□□ -0.39
SF1-206ENST00000413725 ACTR8Q9H981 624 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 APMAPQ9HDC9 416 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 THSD1Q9NS62 852 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 OXSMQ9NWU1 459 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 NKIRAS1Q9NYS0 192 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 STK38LQ9Y2H1 464 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 PCDHGA3Q9Y5H0 932 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 APC2O95996 2303 aa12.6□□□□□ -0.39
SF1-206ENST00000413725 AKAP13Q12802 2813 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 MED19A0JLT2 244 aaPredicted RBP12.59□□□□□ -0.39
SF1-206ENST00000413725 FEZF1A0PJY2 475 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 TMEM120BA0PK00 339 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 TXNDC9O14530 226 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 DYNC1I1O14576 645 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 ATP8B1O43520 1251 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 OR1F1O43749 312 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 BRINP1O60477 761 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 TRIM13O60858 407 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 MLYCDO95822 493 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 OTCP00480 354 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 EPORP19235 508 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 VARSP26640 1264 aaKnown RBP12.59□□□□□ -0.39
SF1-206ENST00000413725 HNF4AP41235 474 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 CASP2P42575 452 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 ETV4P43268 484 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 VSX2P58304 361 aaPredicted RBP12.59□□□□□ -0.39
SF1-206ENST00000413725 MEF2AQ02078 507 aaPredicted RBP12.59□□□□□ -0.39
SF1-206ENST00000413725 CLCQ05315 142 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 PCDH1Q08174 1060 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 DOC2AQ14183 400 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 SLBPQ14493 270 aaKnown RBP eCLIP12.59□□□□□ -0.39
SF1-206ENST00000413725 RBBP5Q15291 538 aaKnown RBP12.59□□□□□ -0.39
SF1-206ENST00000413725 HIST2H2ACQ16777 129 aaPredicted RBP12.59□□□□□ -0.39
SF1-206ENST00000413725 UNC50Q53HI1 259 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 TTMPQ5BVD1 217 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 LIPJQ5W064 366 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 HIST2H2AA3Q6FI13 130 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 TLDC1Q6P9B6 456 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 MYLK4Q86YV6 388 aaPredicted RBP12.59□□□□□ -0.39
SF1-206ENST00000413725 TMEM126BQ8IUX1 230 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 PLD3Q8IV08 490 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 ZNF655Q8N720 491 aaPredicted RBP12.59□□□□□ -0.39
SF1-206ENST00000413725 ANKRD42Q8N9B4 389 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 TTC29Q8NA56 475 aaPredicted RBP12.59□□□□□ -0.39
SF1-206ENST00000413725 MFSD9Q8NBP5 474 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 TTLQ8NG68 377 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 OR1L3Q8NH93 324 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 UBE2E3Q969T4 207 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 MAGEB10Q96LZ2 347 aaPredicted RBP12.59□□□□□ -0.39
SF1-206ENST00000413725 NSUN5Q96P11 429 aaKnown RBP12.59□□□□□ -0.39
SF1-206ENST00000413725 OR2A5Q96R48 311 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 SARGQ9BW04 601 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 NLNQ9BYT8 704 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 SLC7A5P2Q9GIP4 190 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 DRC3Q9H069 523 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 SEMA4BQ9NPR2 832 aaPredicted RBP12.59□□□□□ -0.39
SF1-206ENST00000413725 GEMIN8Q9NWZ8 242 aaKnown RBP12.59□□□□□ -0.39
SF1-206ENST00000413725 PCDHGA7Q9Y5G6 932 aa12.59□□□□□ -0.39
SF1-206ENST00000413725 PCDHGA4Q9Y5G9 962 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms