RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 METTL21AQ8WXB1 218 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 FAM46BQ96A09 425 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 TBC1D31Q96DN5 1066 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 SPATA13Q96N96 652 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 TSSK2Q96PF2 358 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 FSD1Q9BTV5 496 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 ACPTQ9BZG2 426 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 SLC39A8Q9C0K1 460 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 ABCG8Q9H221 673 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 ANO10Q9NW15 660 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 APPL1Q9UKG1 709 aa4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 TDRKHQ9Y2W6 561 aaKnown RBP4.36□□□□□ -1.71
HMGB3P31-201ENST00000413333 A0A0B4J203 849 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 NPIPA3F8WFD2 350 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 FPGTO14772 594 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 PRKNO60260 465 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 IGHV4-31P0DP07 118 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 SNHG28P0DPA3 235 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 GOT1P17174 413 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 CA6P23280 308 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 DUTP33316 252 aaKnown RBP4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 THBS3P49746 956 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 CLK1P49759 484 aaKnown RBP4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 NANOS2P60321 138 aaKnown RBP4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 GALK2Q01415 458 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 IL1RL1Q01638 556 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 ACKR1Q16570 336 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 GPR33Q49SQ1 333 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 PARP10Q53GL7 1025 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZNF542PQ5EBM4 170 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 KCTD11Q693B1 232 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 SPSB3Q6PJ21 355 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 FOXL2NBQ6ZUU3 175 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 PRSS42Q7Z5A4 293 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 RBM23Q86U06 439 aaKnown RBP4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 ASPGQ86U10 573 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 TMEM126BQ8IUX1 230 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 LRTM2Q8N967 370 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 SMYD1Q8NB12 490 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 SCARB1Q8WTV0 552 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 RFT1Q96AA3 541 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 ALG14Q96F25 216 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 EPSTI1Q96J88 318 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 LYZL4Q96KX0 146 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 RASL10BQ96S79 203 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 RUFY1Q96T51 708 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 ALKBH7Q9BT30 221 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 SPXQ9BT56 116 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 NACAP1Q9BZK3 213 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZNF510Q9Y2H8 683 aa4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 SPAG9O60271 1321 aaKnown RBP4.35□□□□□ -1.71
HMGB3P31-201ENST00000413333 MAGEB16A2A368 324 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 DENND3A2RUS2 1198 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 ANKDD1BA6NHY2 528 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 C19orf81C9J6K1 198 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 H3BMM5 538 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 ATP6V0E1O15342 81 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 ACSL4O60488 711 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 CIDEAO60543 219 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 SEC22BO75396 215 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 NTN1O95631 604 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 PCP11498 1178 aaKnown RBP4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 LIFP15018 202 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 TYMPP19971 482 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 MAPK3P27361 379 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 GLIPR1P48060 266 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 LBX1P52954 281 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 CASP9P55211 416 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 SLC34A1Q06495 639 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 WASHC5Q12768 1159 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 KEAP1Q14145 624 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZNF585BQ52M93 769 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 SLC25A53Q5H9E4 307 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 TECRLQ5HYJ1 363 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZNF324BQ6AW86 544 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZNF770Q6IQ21 691 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 MARK2Q7KZI7 788 aaKnown RBP4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 GPR141Q7Z602 305 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 ISCA2Q86U28 154 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 NFE4Q86UQ8 179 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 LRRC8CQ8TDW0 803 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 VOPP1Q96AW1 172 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 RBM41Q96IZ5 413 aaKnown RBP4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 ZNF560Q96MR9 790 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 BTBD9Q96Q07 612 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 MTMR12Q9C0I1 747 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 SHARPINQ9H0F6 387 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 NAPBQ9H115 298 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 UBQLN3Q9H347 655 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 CPVLQ9H3G5 476 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 C10orf88Q9H8K7 445 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 RAVER2Q9HCJ3 691 aaKnown RBP4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 GPR173Q9NS66 373 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 PNPLA3Q9NST1 481 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 FAM118AQ9NWS6 357 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 HMG20BQ9P0W2 317 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 IL19Q9UHD0 177 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 SLC12A6Q9UHW9 1150 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 MAD2L2Q9UI95 211 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 NCKAP1Q9Y2A7 1128 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms