RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 LINGO4Q6UY18 593 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 ZNF621Q6ZSS3 439 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 FAM124AQ86V42 546 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 DEPDC4Q8N2C3 294 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 DENND6BQ8NEG7 585 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 CHTF18Q8WVB6 975 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 KCNC2Q96PR1 638 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 CCDC32Q9BV29 185 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 OR2B2Q9GZK3 357 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 TP63Q9H3D4 680 aaPredicted RBP17.06■□□□□ 0.32
SDCBP-202ENST00000413219 ARL15Q9NXU5 204 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 CRLS1Q9UJA2 301 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 LYVE1Q9Y5Y7 322 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 KMOO15229 486 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 ADORA3P0DMS8 318 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 PPIBP23284 216 aaKnown RBP17.06■□□□□ 0.32
SDCBP-202ENST00000413219 GRK5P34947 590 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 SOX6P35712 828 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 NR4A2P43354 598 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 NEK2P51955 445 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 ZNF33BQ06732 778 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 CSTF3Q12996 717 aaKnown RBP17.06■□□□□ 0.32
SDCBP-202ENST00000413219 SPANXN2Q5MJ10 180 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 RNF19BQ6ZMZ0 732 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 CCDC190Q86UF4 302 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 C9orf43Q8TAL5 461 aaPredicted RBP17.06■□□□□ 0.32
SDCBP-202ENST00000413219 C2orf15Q8WU43 125 aaKnown RBP17.06■□□□□ 0.32
SDCBP-202ENST00000413219 FAM193BQ96PV7 902 aaPredicted RBP17.06■□□□□ 0.32
SDCBP-202ENST00000413219 RMI1Q9H9A7 625 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 CORO2BQ9UQ03 480 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 PCDHB11Q9Y5F2 797 aa17.06■□□□□ 0.32
SDCBP-202ENST00000413219 GLYATL1P3A0A0U1RQE8 302 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 FAM172BPA6NC97 362 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 ADAMDEC1O15204 470 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 SUV39H1O43463 412 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 TLL1O43897 1013 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 AOC2O75106 756 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 CCNKO75909 580 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 KLKB1P03952 638 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 KRT8P05787 483 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 ANXA8P13928 327 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 RRM2P31350 389 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 PIK3CBP42338 1070 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 RGS6P49758 472 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 TIMM50Q3ZCQ8 353 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 ARMCX4Q5H9R4 360 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.05■□□□□ 0.32
SDCBP-202ENST00000413219 ADGRF1Q5T601 910 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 ZNF367Q7RTV3 350 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 ZNF605Q86T29 641 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 SYT12Q8IV01 421 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 TRPV1Q8NER1 839 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 TPD52L3Q96J77 140 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 NUAK2Q9H093 628 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 OR51E2Q9H255 320 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 CHST8Q9H2A9 424 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 RUBCNLQ9H714 662 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 QPCTLQ9NXS2 382 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 EHD3Q9NZN3 535 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 POFUT2Q9Y2G5 429 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 A8MVJ9 347 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 ZW10O43264 779 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 C1QCP02747 245 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 CORO1AP31146 461 aaKnown RBP17.05■□□□□ 0.32
SDCBP-202ENST00000413219 SLC6A12P48065 614 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 HNMTP50135 292 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 NKX2-5P52952 324 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-202ENST00000413219 HKDC1Q2TB90 917 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 C10orf62Q5T681 223 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-202ENST00000413219 RSBN1Q5VWQ0 802 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-202ENST00000413219 FRG2Q64ET8 278 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 ZNF544Q6NX49 715 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 SLC24A5Q71RS6 500 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 C16orf59Q7L2K0 433 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 NXPE1Q8N323 547 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 CBARPQ8N350 705 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-202ENST00000413219 CLIP4Q8N3C7 705 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 STX19Q8N4C7 294 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 C17orf50Q8WW18 174 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 SOCS4Q8WXH5 440 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 OVCA2Q8WZ82 227 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 FRG2BQ96QU4 278 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 DPH2Q9BQC3 489 aaPredicted RBP17.05■□□□□ 0.32
SDCBP-202ENST00000413219 DOHHQ9BU89 302 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 EMILIN2Q9BXX0 1053 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 FBXL12Q9NXK8 326 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 CFL2Q9Y281 166 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 TRAPPC4Q9Y296 219 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 PCDHGA2Q9Y5H1 932 aa17.05■□□□□ 0.32
SDCBP-202ENST00000413219 VWA8A3KMH1 1905 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 LOC100506127A0A0U1RQW1 187 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 TNFRSF11BO00300 401 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 STC2O76061 302 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 GJB5O95377 273 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 TRBC1P01850 177 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 ABCB1P08183 1280 aaPredicted RBP17.04■□□□□ 0.32
SDCBP-202ENST00000413219 GABRB1P18505 474 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 PCGF2P35227 344 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 PTPN5P54829 565 aa17.04■□□□□ 0.32
SDCBP-202ENST00000413219 DUSP4Q13115 394 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms