RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 ITPAQ9BY32 194 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 TPT1P8Q9HAU6 139 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 RNF186Q9NXI6 227 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 VPS29Q9UBQ0 182 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 LSM7Q9UK45 103 aaKnown RBP18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 PNMA8BQ9ULN7 279 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 WDR37Q9Y2I8 494 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 PCDHB11Q9Y5F2 797 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 SLC16A5O15375 505 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 KDM1AO60341 852 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 SNRPD1P62314 119 aaKnown RBP18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 CSNK2BP67870 215 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 PTSQ03393 145 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 DDX39BQ13838 428 aaKnown RBP18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 TCTN1Q2MV58 587 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 AGAP7PQ5VUJ5 663 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 TXNDC8Q6A555 127 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 ENTHD1Q8IYW4 607 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 CADM3Q8N126 398 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 SYNPOQ8N3V7 929 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 CPA6Q8N4T0 437 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 STARD8Q92502 1023 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 FCGR1BQ92637 280 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 EPYCQ99645 322 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 BBS2Q9BXC9 721 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 DSN1Q9H410 356 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 RUBCNLQ9H714 662 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 ANKHQ9HCJ1 492 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 ADPRHL2Q9NX46 363 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 KIAA1522Q9P206 1035 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 OSGIN1Q9UJX0 560 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 ABT1Q9ULW3 272 aaKnown RBP18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 RUVBL1Q9Y265 456 aaKnown RBP18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 GFYI3L273 518 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 LHCGRP22888 699 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 TMED10P49755 219 aaKnown RBP18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 CLK1P49759 484 aaKnown RBP18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 ACSM2AQ08AH3 577 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 MAPK11Q15759 364 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 PLEKHS1Q5SXH7 462 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 UBE2UQ5VVX9 321 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 LIPJQ5W064 366 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 ACSM2BQ68CK6 577 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 FAM217AQ8IXS0 508 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 CRIPAKQ8N1N5 446 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 MCFD2Q8NI22 146 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 APH1BQ8WW43 257 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 SH3KBP1Q96B97 665 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 SPATA9Q9BWV2 254 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 MBD1Q9UIS9 605 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 FZD4Q9ULV1 537 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 CLEC4EQ9ULY5 219 aa18.38■□□□□ 0.53
TNFRSF8-202ENST00000413146 HTTP42858 3142 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 SUV39H1O43463 412 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 MYO1DO94832 1006 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 EFEMP2O95967 443 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 NTRK1P04629 796 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 LAMP1P11279 417 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 CD70P32970 193 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 TGFBR1P36897 503 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 PFN3P60673 137 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 ZNF33BQ06732 778 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 XKR6Q5GH73 641 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 DNASE1L2Q92874 299 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 SLC38A4Q969I6 547 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 HRASLS5Q96KN8 279 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 SIGLEC11Q96RL6 698 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 ZIC5Q96T25 663 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 MTERF1Q99551 399 aaKnown RBP18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 TSEN34Q9BSV6 310 aaKnown RBP18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 COPS4Q9BT78 406 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 DUSP26Q9BV47 211 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 GABARAPL3Q9BY60 117 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 ERVK-11Q9UQG0 969 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 AQP9O43315 295 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 UGDHO60701 494 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 DPM1O60762 260 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 ATP1B2P14415 290 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 STK19P49842 368 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 ZDHHC20Q5W0Z9 365 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 GPR153Q6NV75 609 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 IGSF21Q96ID5 467 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 HHIPL1Q96JK4 782 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 C7orf34Q96L11 122 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 DCSTAMPQ9H295 470 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 SUV39H2Q9H5I1 410 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 PRM3Q9NNZ6 103 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 CORO2BQ9UQ03 480 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 PCDHGA6Q9Y5G7 932 aa18.37■□□□□ 0.53
TNFRSF8-202ENST00000413146 TRIM43BA6NCK2 446 aa18.36■□□□□ 0.53
TNFRSF8-202ENST00000413146 SCAMP2O15127 329 aaKnown RBP18.36■□□□□ 0.53
TNFRSF8-202ENST00000413146 RRM2P31350 389 aa18.36■□□□□ 0.53
TNFRSF8-202ENST00000413146 GSSP48637 474 aa18.36■□□□□ 0.53
TNFRSF8-202ENST00000413146 PPP5CP53041 499 aa18.36■□□□□ 0.53
TNFRSF8-202ENST00000413146 KCNJ10P78508 379 aa18.36■□□□□ 0.53
TNFRSF8-202ENST00000413146 SYT16Q17RD7 645 aa18.36■□□□□ 0.53
TNFRSF8-202ENST00000413146 ABHD8Q96I13 439 aa18.36■□□□□ 0.53
TNFRSF8-202ENST00000413146 ZNF334Q9HCZ1 680 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF8-202ENST00000413146 CD84Q9UIB8 345 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms