RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 SSX5O60225 188 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 HSF2BPO75031 334 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 PRDM1O75626 825 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 PDE9AO76083 593 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 AK1P00568 194 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 H1F0P07305 194 aaKnown RBP4.79□□□□□ -1.64
LSM5-206ENST00000409987 CKMT2P17540 419 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 DNAJB1P25685 340 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 PSMB4P28070 264 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 GBX2P52951 348 aaPredicted RBP4.79□□□□□ -1.64
LSM5-206ENST00000409987 MLLT10P55197 1068 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 FOXG1P55316 489 aaPredicted RBP4.79□□□□□ -1.64
LSM5-206ENST00000409987 POLR2LP62875 67 aaKnown RBP4.79□□□□□ -1.64
LSM5-206ENST00000409987 PMP22Q01453 160 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 GCNT1Q02742 428 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 PRKCZQ05513 592 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 SCGB2A2Q13296 93 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 KEAP1Q14145 624 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 NADSYN1Q6IA69 706 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 LINGO4Q6UY18 593 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 C15orf52Q6ZUT6 534 aaKnown RBP4.79□□□□□ -1.64
LSM5-206ENST00000409987 LONP2Q86WA8 852 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 UNC5CLQ8IV45 518 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 ARHGAP24Q8N264 748 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 CPSF7Q8N684 471 aaKnown RBP4.79□□□□□ -1.64
LSM5-206ENST00000409987 OTUD6BQ8N6M0 293 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 ZNF611Q8N823 705 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 AMER3Q8N944 861 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 CLEC1AQ8NC01 280 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 SLC24A4Q8NFF2 622 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 CHURC1Q8WUH1 139 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 THRSPQ92748 146 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 DTD2Q96FN9 168 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 ABHD8Q96I13 439 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 IL17FQ96PD4 163 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 ERP44Q9BS26 406 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 POLR3CQ9BUI4 534 aaPredicted RBP4.79□□□□□ -1.64
LSM5-206ENST00000409987 C1QTNF4Q9BXJ3 329 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 CCSER1Q9C0I3 900 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 HIPK2Q9H2X6 1198 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 VPS37BQ9H9H4 285 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 PPANQ9NQ55 473 aaKnown RBP4.79□□□□□ -1.64
LSM5-206ENST00000409987 CENPMQ9NSP4 180 aa4.79□□□□□ -1.64
LSM5-206ENST00000409987 ZNF608Q9ULD9 1512 aaPredicted RBP4.78□□□□□ -1.64
LSM5-206ENST00000409987 FANCD2Q9BXW9 1451 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 DUXAA6NLW8 204 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 TMEM110-MUSTN1A8MSY1 372 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 PRAC2D3DTV9 90 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 SLC28A2O43868 658 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 KLHL41O60662 606 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 RAD51DO75771 328 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 WDPCPO95876 746 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 SNHG28P0DPA3 235 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 CD22P20273 847 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 PITPNBP48739 271 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 RGS7P49802 495 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 THOP1P52888 689 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 FOLH1Q04609 750 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 MBTD1Q05BQ5 628 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 CETN1Q12798 172 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 MFAP5Q13361 173 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 TSTA3Q13630 321 aaPredicted RBP4.78□□□□□ -1.64
LSM5-206ENST00000409987 CEBPEQ15744 281 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 DUOXA1Q1HG43 343 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 RABL6Q3YEC7 729 aaPredicted RBP4.78□□□□□ -1.64
LSM5-206ENST00000409987 BOLA3Q53S33 107 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 TAF1BQ53T94 588 aaPredicted RBP4.78□□□□□ -1.64
LSM5-206ENST00000409987 KCTD11Q693B1 232 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 RAET1GQ6H3X3 334 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 OR6B2Q6IFH4 312 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 ZNF517Q6ZMY9 492 aaPredicted RBP4.78□□□□□ -1.64
LSM5-206ENST00000409987 ARMCX2Q7L311 632 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 OR52K2Q8NGK3 314 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 RNF128Q8TEB7 428 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 MOB3AQ96BX8 217 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 SGF29Q96ES7 293 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 CFAP36Q96G28 342 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 CFAP53Q96M91 514 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 WACQ9BTA9 647 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 CARD6Q9BX69 1037 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 ACPTQ9BZG2 426 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 VN1R1Q9GZP7 353 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 RAB17Q9H0T7 212 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 C6orf106Q9H6K1 298 aaPredicted RBP4.78□□□□□ -1.64
LSM5-206ENST00000409987 FAM212BQ9NTI7 297 aaPredicted RBP4.78□□□□□ -1.64
LSM5-206ENST00000409987 GPR132Q9UNW8 380 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 KDRP35968 1356 aa4.78□□□□□ -1.64
LSM5-206ENST00000409987 A0A1B0GWJ7 208 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 PLSCR5A0PG75 271 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 F8WDY8 70 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 ATP9AO75110 1047 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 OR6B1O95007 311 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 LUC7L3O95232 432 aaKnown RBP4.77□□□□□ -1.65
LSM5-206ENST00000409987 BAG4O95429 457 aaKnown RBP4.77□□□□□ -1.65
LSM5-206ENST00000409987 ACSL3O95573 720 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 CXCL14O95715 111 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 KRT6BP04259 564 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 NR1D1P20393 614 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 SOX6P35712 828 aa4.77□□□□□ -1.65
LSM5-206ENST00000409987 KRT6CP48668 564 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms