RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SLC26A3P40879 764 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 SOX8P57073 446 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 OCA2Q04671 838 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 DSG2Q14126 1118 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 ZNF460Q14592 562 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 MYBPC3Q14896 1274 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 VWA2Q5GFL6 755 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 GARNL3Q5VVW2 1013 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 SBSNQ6UWP8 590 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 SLC26A11Q86WA9 606 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 PRSS58Q8IYP2 241 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 RBMXL3Q8N7X1 1067 aaKnown RBP16.84■□□□□ 0.29
LSM5-204ENST00000409909 AMER3Q8N944 861 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 PYROXD1Q8WU10 500 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 HIST1H2AHQ96KK5 128 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 HIST1H2AJQ99878 128 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 MACROD1Q9BQ69 325 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 H2AFJQ9BTM1 129 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 MFRPQ9BY79 579 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 ZNF552Q9H707 407 aaPredicted RBP16.84■□□□□ 0.29
LSM5-204ENST00000409909 SAYSD1Q9NPB0 183 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 ATP13A2Q9NQ11 1180 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 SEMA3GQ9NS98 782 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 ARL15Q9NXU5 204 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 CDC14AQ9UNH5 594 aa16.84■□□□□ 0.29
LSM5-204ENST00000409909 A0A0A6YYC8 382 aaPredicted RBP16.83■□□□□ 0.28
LSM5-204ENST00000409909 FAM95CA0A1B0GW59 222 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 FEZF1A0PJY2 475 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 CXorf49A8MYA2 514 aaPredicted RBP16.83■□□□□ 0.28
LSM5-204ENST00000409909 I3L1I5 382 aaPredicted RBP16.83■□□□□ 0.28
LSM5-204ENST00000409909 TXNDC9O14530 226 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 LCMT2O60294 686 aaKnown RBP16.83■□□□□ 0.28
LSM5-204ENST00000409909 ZNF37AP17032 561 aaPredicted RBP16.83■□□□□ 0.28
LSM5-204ENST00000409909 SSTR1P30872 391 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 CD97P48960 835 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 AP1S2P56377 157 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 TAS2R39P59534 338 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 CALCOCO2Q13137 446 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 TRADDQ15628 312 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 LRRK2Q5S007 2527 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 VWA5B1Q5TIE3 1220 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 JMJD6Q6NYC1 403 aaPredicted RBP16.83■□□□□ 0.28
LSM5-204ENST00000409909 LCTLQ6UWM7 567 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 C17orf64Q86WR6 236 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 CEP97Q8IW35 865 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 OR11G2Q8NGC1 345 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 OR56A3Q8NH54 315 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 MIB2Q96AX9 1013 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 MIEF2Q96C03 454 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 PYCR2Q96C36 320 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 FBXL8Q96CD0 374 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 MVB12AQ96EY5 273 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 MMABQ96EY8 250 aaPredicted RBP16.83■□□□□ 0.28
LSM5-204ENST00000409909 OR4K3Q96R72 315 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 CRB3Q9BUF7 120 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 DRC3Q9H069 523 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 TRPC4Q9UBN4 977 aa16.83■□□□□ 0.28
LSM5-204ENST00000409909 G3BP2Q9UN86 482 aaKnown RBP16.83■□□□□ 0.28
LSM5-204ENST00000409909 CDC7O00311 574 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 DPM1O60762 260 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 SORBS2O94875 1100 aaKnown RBP16.82■□□□□ 0.28
LSM5-204ENST00000409909 GUCA1CO95843 209 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 CDH1P12830 882 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 CCND1P24385 295 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 BCL6P41182 706 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 RPS15AP62244 130 aaKnown RBP16.82■□□□□ 0.28
LSM5-204ENST00000409909 AIMP2Q13155 320 aaKnown RBP16.82■□□□□ 0.28
LSM5-204ENST00000409909 RBBP7Q16576 425 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 PPP1R3AQ16821 1122 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 SYT16Q17RD7 645 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 CAPN13Q6MZZ7 669 aaPredicted RBP16.82■□□□□ 0.28
LSM5-204ENST00000409909 ZNF572Q7Z3I7 529 aaPredicted RBP16.82■□□□□ 0.28
LSM5-204ENST00000409909 SHISA5Q8N114 240 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 Q8NA96 180 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 ANKRD49Q8WVL7 239 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 TM4SF19Q96DZ7 209 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 RHOJQ9H4E5 214 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 ZBTB20Q9HC78 741 aaPredicted RBP16.82■□□□□ 0.28
LSM5-204ENST00000409909 LUZP4Q9P127 313 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 C5AR2Q9P296 337 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 C3orf18Q9UK00 162 aa16.82■□□□□ 0.28
LSM5-204ENST00000409909 TTLL8A6PVC2 850 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 EIF3HO15372 352 aaKnown RBP eCLIP16.81■□□□□ 0.28
LSM5-204ENST00000409909 C1QAP02745 245 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 ENO2P09104 434 aaPredicted RBP16.81■□□□□ 0.28
LSM5-204ENST00000409909 PLTPP55058 493 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 GPX6P59796 221 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 Q0VFX4 171 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 FAM53BQ14153 422 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 ATG9BQ674R7 924 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 SLC6A19Q695T7 634 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 PRSS41Q7RTY9 318 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 HPS6Q86YV9 775 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 NKAPQ8N5F7 415 aaKnown RBP16.81■□□□□ 0.28
LSM5-204ENST00000409909 ABHD11Q8NFV4 315 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 OR4K1Q8NGD4 311 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 OR9A4Q8NGU2 314 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 C8orf44Q96CB5 159 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 THAP11Q96EK4 314 aa16.81■□□□□ 0.28
LSM5-204ENST00000409909 VPS39Q96JC1 886 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms