RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 XRCC1P18887 633 aaPredicted RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PEBP1P30086 187 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SERPINB1P30740 379 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SHMT2P34897 504 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 GCKP35557 465 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 ACTR1BP42025 376 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 CXCL12P48061 93 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 NME5P56597 212 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 CLDN8P56748 225 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 KCNK10P57789 538 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 ACTR1AP61163 376 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 ZXDAP98168 799 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 RPS6KA2Q15349 733 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 ADNP2Q6IQ32 1131 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 GALNT18Q6P9A2 607 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 BNC2Q6ZN30 1099 aaPredicted RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 VN1R5Q7Z5H4 357 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PARGQ86W56 976 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 C17orf64Q86WR6 236 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 HID1Q8IV36 788 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 RIMKLAQ8IXN7 391 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 FBXW8Q8N3Y1 598 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 RNF175Q8N4F7 328 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 MINDY1Q8N5J2 469 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 DPP10Q8N608 796 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SMYD1Q8NB12 490 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PCYOX1LQ8NBM8 494 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 CHTF18Q8WVB6 975 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 N4BP2L2Q92802 583 aaPredicted RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 KLHDC7BQ96G42 594 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SLC45A3Q96JT2 553 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 DHRS1Q96LJ7 313 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SARGQ9BW04 601 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 ABCD2Q9UBJ2 740 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 ADGRE2Q9UHX3 823 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PCDHB11Q9Y5F2 797 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 IGKV1-8A0A0C4DH67 115 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 CCDC163A0A0D9SF12 145 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SCAMP1O15126 338 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 NPPAP01160 153 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 TDGF1P13385 188 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PSMB5P28074 263 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 HNRNPH1P31943 449 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SLC19A1P41440 591 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 HNRNPFP52597 415 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PSME3P61289 254 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 RACK1P63244 317 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 UBE2IP63279 158 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 RAE1P78406 368 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 ABATP80404 500 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PRDX1Q06830 199 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 ILF3Q12906 894 aaKnown RBP eCLIP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 ART3Q13508 389 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PTGR1Q14914 329 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 HIST2H2ACQ16777 129 aaPredicted RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 TRMT5Q32P41 509 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 MMEL1Q495T6 779 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 VPS26BQ4G0F5 336 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SPIN4Q56A73 249 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 HIST2H2AA3Q6FI13 130 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 NOXRED1Q6NXP6 359 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 IYDQ6PHW0 289 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 RD3Q7Z3Z2 195 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PHACTR4Q8IZ21 702 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 KRT78Q8N1N4 520 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 WDR60Q8WVS4 1066 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 TESCQ96BS2 214 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 SPACA7Q96KW9 195 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 MTERF1Q99551 399 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 GSDMCQ9BYG8 508 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 TCEAL2Q9H3H9 227 aaPredicted RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 CD320Q9NPF0 282 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PRMT8Q9NR22 394 aaPredicted RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 POT1Q9NUX5 634 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 CUEDC1Q9NWM3 386 aaPredicted RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 OR6C2Q9NZP2 312 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 TMEM181Q9P2C4 612 aa5.31□□□□□ -1.56
EPHA4-202ENST00000409854 LEF1Q9UJU2 399 aaPredicted RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 RUVBL1Q9Y265 456 aaKnown RBP5.31□□□□□ -1.56
EPHA4-202ENST00000409854 PRAMEF33A0A0G2JMD5 474 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 ANGPT2O15123 496 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 AXIN1O15169 862 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 PRMT3O60678 531 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 TRIOO75962 3097 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 TBX6O95947 436 aaPredicted RBP5.3□□□□□ -1.56
EPHA4-202ENST00000409854 CXCR2P25025 360 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 CD38P28907 300 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 PXNP49023 591 aaPredicted RBP5.3□□□□□ -1.56
EPHA4-202ENST00000409854 BLKP51451 505 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 CCR8P51685 355 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 CLNS1AP54105 237 aaKnown RBP5.3□□□□□ -1.56
EPHA4-202ENST00000409854 ACTR3P61158 418 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 RPS13P62277 151 aaKnown RBP5.3□□□□□ -1.56
EPHA4-202ENST00000409854 YBX1P67809 324 aaKnown RBP5.3□□□□□ -1.56
EPHA4-202ENST00000409854 SPATS1Q496A3 300 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 THEMIS2Q5TEJ8 643 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 PRMT9Q6P2P2 845 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 SLC30A9Q6PML9 568 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 TMIGD1Q6UXZ0 262 aa5.3□□□□□ -1.56
EPHA4-202ENST00000409854 PRR23BQ6ZRT6 265 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms