RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 XKR6Q5GH73 641 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 ARL13AQ5H913 290 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-203ENST00000409254 TCTE1Q5JU00 501 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 CACHD1Q5VU97 1274 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 MED27Q6P2C8 311 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 TMIGD1Q6UXZ0 262 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 MILR1Q7Z6M3 343 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 TAX1BP1Q86VP1 789 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 TMPRSS12Q86WS5 348 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 LRRC34Q8IZ02 419 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 GALNT15Q8N3T1 639 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 ZNF655Q8N720 491 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-203ENST00000409254 DCBLD1Q8N8Z6 715 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 TRPV3Q8NET8 790 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 OR52B6Q8NGF0 335 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 ESAMQ96AP7 390 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 METTL2AQ96IZ6 378 aaKnown RBP12.5□□□□□ -0.41
LIMS2-203ENST00000409254 ZNF285Q96NJ3 590 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 FCRL4Q96PJ5 515 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 SIKE1Q9BRV8 207 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 ILKAPQ9H0C8 392 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-203ENST00000409254 BRF2Q9HAW0 419 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 FANCEQ9HB96 536 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 SEMA4BQ9NPR2 832 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-203ENST00000409254 GEMIN8Q9NWZ8 242 aaKnown RBP12.5□□□□□ -0.41
LIMS2-203ENST00000409254 PILRAQ9UKJ1 303 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 PCDHGA4Q9Y5G9 962 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 AP1M2Q9Y6Q5 423 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 SPTBN2O15020 2390 aa12.5□□□□□ -0.41
LIMS2-203ENST00000409254 IGHV5-51A0A0C4DH38 117 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 NPIPB8E9PQR5 432 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 FOXE1O00358 373 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-203ENST00000409254 RASSF9O75901 435 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 HSPA4LO95757 839 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 CHEK2O96017 543 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 ST6GAL1P15907 406 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 PCSK2P16519 638 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 SCTRP47872 440 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 PPM1FP49593 454 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-203ENST00000409254 ATP1A2P50993 1020 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 NOVA1P51513 510 aaKnown RBP12.49□□□□□ -0.41
LIMS2-203ENST00000409254 PDX1P52945 283 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 INHBCP55103 352 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 CDH13P55290 713 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 SH3BP2P78314 561 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 CSTF3Q12996 717 aaKnown RBP12.49□□□□□ -0.41
LIMS2-203ENST00000409254 FBXO48Q5FWF7 155 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 YOD1Q5VVQ6 348 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-203ENST00000409254 NKAIN2Q5VXU1 208 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 NIPAL1Q6NVV3 410 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 LETMD1Q6P1Q0 360 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 ZNF574Q6ZN55 896 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-203ENST00000409254 ZCCHC23Q6ZST2 131 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 CUZD1Q86UP6 607 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 LSMEM2Q8N112 164 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 C2orf73Q8N5S3 287 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-203ENST00000409254 GBP7Q8N8V2 638 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-203ENST00000409254 AGBL5Q8NDL9 886 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 OR4F6Q8NGB9 312 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 TRPC4APQ8TEL6 797 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 ADAMTS14Q8WXS8 1223 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 ZBTB9Q96C00 473 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 CCDC74BQ96LY2 380 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 MLXIPLQ9NP71 852 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 MID1IP1Q9NPA3 183 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 CUEDC1Q9NWM3 386 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-203ENST00000409254 SIDT1Q9NXL6 827 aaKnown RBP12.49□□□□□ -0.41
LIMS2-203ENST00000409254 VTI1BQ9UEU0 232 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 ZFP69BQ9UJL9 534 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 SH2B3Q9UQQ2 575 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 CROCCQ5TZA2 2017 aa12.49□□□□□ -0.41
LIMS2-203ENST00000409254 B4E171 279 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 H7BY64 318 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 AZIN1O14977 448 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 ZSCAN9O15535 394 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-203ENST00000409254 PRAMEF4O60810 478 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 CLEC3AO75596 197 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 TGDSO95455 350 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 SLC35G6P0C7Q6 338 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 HOXB3P14651 431 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-203ENST00000409254 CD22P20273 847 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 HMOX2P30519 316 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 TSPAN7P41732 249 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 LSSP48449 732 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 ARL4DP49703 201 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 RAB15P59190 212 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 ERVPABLB-1P60509 514 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 PPP1CAP62136 330 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 SIM1P81133 766 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-203ENST00000409254 IFT88Q13099 833 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 PWP1Q13610 501 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 SLBPQ14493 270 aaKnown RBP eCLIP12.48□□□□□ -0.41
LIMS2-203ENST00000409254 IL11RAQ14626 422 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 CATSPEREQ5SY80 951 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 GARNL3Q5VVW2 1013 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 PRAMEF9Q5VWM5 478 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 KANK2Q63ZY3 851 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 FRG2Q64ET8 278 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 FCRL6Q6DN72 434 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 FAM92BQ6ZTR7 304 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms