RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 BICRALQ6AI39 1079 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 TMEM151BQ8IW70 566 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 PGAM4Q8N0Y7 254 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 TTYH1Q9H313 450 aaPredicted RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 MINDY3Q9H8M7 445 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 ADAMDEC1O15204 470 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 TGDSO95455 350 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 IL1R2P27930 398 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 SLC11A1P49279 550 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 AP1S2P56377 157 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 NKAPLQ5M9Q1 402 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 FITM2Q8N6M3 262 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 RADILQ96JH8 1075 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 GALPQ9UBC7 116 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 HS3ST4Q9Y661 456 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 SOX30O94993 753 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 CSF2RAP15509 400 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 TSHRP16473 764 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 HK1P19367 917 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 CEACAM20Q6UY09 585 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 OXR1Q8N573 874 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 CELF5Q8N6W0 485 aaKnown RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 BPIFB1Q8TDL5 484 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 SORCS1Q8WY21 1168 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 RAB8BQ92930 207 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 SLC7A6OSQ96CW6 309 aaPredicted RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 ORAI3Q9BRQ5 295 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 SLC6A15Q9H2J7 730 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 CCDC59Q9P031 241 aaKnown RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 VPS29Q9UBQ0 182 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 TNFSF12O43508 249 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 SSX5O60225 188 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 STK19P49842 368 aaPredicted RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 ZNF41P51814 821 aaPredicted RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 CD83Q01151 205 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 ZNF267Q14586 743 aaPredicted RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 ADGRD1Q6QNK2 874 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 MBOAT1Q6ZNC8 495 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 MOCOSQ96EN8 888 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 PCBD2Q9H0N5 130 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 C14orf105Q9NVL8 296 aa13.39□□□□□ -0.27
VAPA-202ENST00000400000 IFT80Q9P2H3 777 aaPredicted RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 ZNF282Q9UDV7 671 aaPredicted RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 RUVBL1Q9Y265 456 aaKnown RBP13.39□□□□□ -0.27
VAPA-202ENST00000400000 CCDC163A0A0D9SF12 145 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 A0A1W2PRQ8 180 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 OR14I1A6ND48 311 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 EFCAB9A8MZ26 197 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 C6orf47O95873 294 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 UFM1P61960 85 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 BNIP3Q12983 259 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 SLC22A17Q8WUG5 538 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 TDP1Q9NUW8 608 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 DNAJB4Q9UDY4 337 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 PDE10AQ9Y233 779 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 ARHGAP23Q9P227 1491 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 ADH7P40394 386 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 RAB39AQ14964 217 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 RAB30Q15771 203 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 PLCZ1Q86YW0 608 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 ZNF296Q8WUU4 475 aaPredicted RBP13.38□□□□□ -0.27
VAPA-202ENST00000400000 PRR11Q96HE9 360 aaPredicted RBP13.38□□□□□ -0.27
VAPA-202ENST00000400000 TMEM74Q96NL1 305 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 C17orf62Q9BQA9 187 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 KCNH6Q9H252 994 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 AKTIPQ9H8T0 292 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 TRPV4Q9HBA0 871 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 TXNRD2Q9NNW7 524 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 ZDHHC3Q9NYG2 299 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 CALML5Q9NZT1 146 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 KIDINS220Q9ULH0 1771 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 A0A1W2PP55 124 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 CYP17A1P05093 508 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 AGTR2P50052 363 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 RBM20Q5T481 1227 aaKnown RBP13.38□□□□□ -0.27
VAPA-202ENST00000400000 MARCH9Q86YJ5 346 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 ZNF350Q9GZX5 532 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 EBF2Q9HAK2 575 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 DNAJC27Q9NZQ0 273 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 CFL1P23528 166 aaKnown RBP13.38□□□□□ -0.27
VAPA-202ENST00000400000 VAMP1P23763 118 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 OCLNQ16625 522 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 TIGD6Q17RP2 521 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 SDR16C5Q8N3Y7 309 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 TRMT10AQ8TBZ6 339 aaKnown RBP13.38□□□□□ -0.27
VAPA-202ENST00000400000 MRIQ9BWK5 157 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 NPLQ9BXD5 320 aaPredicted RBP13.38□□□□□ -0.27
VAPA-202ENST00000400000 ESR1P03372 595 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 GHRHRQ02643 423 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 SGCAQ16586 387 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 UGT8Q16880 541 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 MYLK3Q32MK0 819 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 PNLDC1Q8NA58 520 aaKnown RBP13.38□□□□□ -0.27
VAPA-202ENST00000400000 TRMOQ9BU70 441 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 ARHGAP39Q9C0H5 1083 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 P2RX2Q9UBL9 471 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 PCDHGC3Q9UN70 934 aa13.38□□□□□ -0.27
VAPA-202ENST00000400000 CLIC1O00299 241 aa13.37□□□□□ -0.27
VAPA-202ENST00000400000 CD2P06729 351 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms