RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 HPS4Q9NQG7 708 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ATXN10Q9UBB4 475 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ATP6V1HQ9UI12 483 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 C3orf18Q9UK00 162 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TBC1D3BA6NDS4 549 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ENO4A6NNW6 628 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PLOD2O00469 737 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RNASET2O00584 256 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 DDX5P17844 614 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 SERPINB1P30740 379 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ARHGDIAP52565 204 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 FCHO2Q0JRZ9 810 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 GTDC1Q4AE62 458 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ENPP6Q6UWR7 440 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 DNAJC14Q6Y2X3 702 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RBM23Q86U06 439 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 NATD1Q8N6N6 113 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 SPDYE1Q8NFV5 336 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 NETO1Q8TDF5 533 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 NEIL2Q969S2 332 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 NRBF2Q96F24 287 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CNDP2Q96KP4 475 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PCBD2Q9H0N5 130 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CCDC177Q9NQR7 707 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 SLC6A13Q9NSD5 602 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ZNF282Q9UDV7 671 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 MUC22E2RYF6 1773 aaPredicted RBP17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 MMP20O60882 483 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 KCNK5O95279 499 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 SNAP29O95721 258 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 SERPINA1P01009 418 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 GNAO1P09471 354 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ENGP17813 658 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CDK9P50750 372 aaKnown RBP17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RAD23AP54725 363 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TBPL1P62380 186 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PPP2R2BQ00005 443 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TAP2Q03519 686 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ELOAQ14241 798 aaKnown RBP17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RBBP5Q15291 538 aaKnown RBP17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ZBED5Q49AG3 693 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CCSMST1Q4G0I0 132 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RBM48Q5RL73 367 aaKnown RBP17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TMEM214Q6NUQ4 689 aaKnown RBP17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 NXPE4Q6UWF7 544 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 LCTLQ6UWM7 567 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ZNF621Q6ZSS3 439 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 GPR155Q7Z3F1 870 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 LRRC56Q8IYG6 542 aaPredicted RBP17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PHACTR4Q8IZ21 702 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 C1orf52Q8N6N3 182 aaKnown RBP17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ZNF555Q8NEP9 628 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 GOT1L1Q8NHS2 421 aaPredicted RBP17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TUBA1CQ9BQE3 449 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 AHSPQ9NZD4 102 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ORC6Q9Y5N6 252 aa17.09■□□□□ 0.33
HLA-DQB1-204ENST00000399084 LRATO95237 230 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PCNAP12004 261 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 HLA-EP13747 358 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 CDH2P19022 906 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 CXCR2P25025 360 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PTX3P26022 381 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 SOX11P35716 441 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ZNF763Q0D2J5 394 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 RUNX3Q13761 415 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TEAD4Q15561 434 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TMEM259Q4ZIN3 620 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PYCR3Q53H96 274 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 OTUD3Q5T2D3 398 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 IKBIPQ70UQ0 350 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TRMT11Q7Z4G4 463 aaKnown RBP17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PDZD3Q86UT5 571 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 AMZ2Q86W34 360 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ANKRD46Q86W74 232 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 KRT78Q8N1N4 520 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 LILRA3Q8N6C8 439 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 OR7A2PQ8NGA2 310 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 SLC5A11Q8WWX8 675 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 ASPSCR1Q9BZE9 553 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 IL1RAPQ9NPH3 570 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PRSS16Q9NQE7 514 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 FAM8A1Q9UBU6 413 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 VPS4AQ9UN37 437 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 CEPT1Q9Y6K0 416 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 V9GYQ6 96 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 CROCCQ5TZA2 2017 aa17.08■□□□□ 0.32
HLA-DQB1-204ENST00000399084 GABRR3A8MPY1 467 aa17.07■□□□□ 0.32
HLA-DQB1-204ENST00000399084 IDSP22304 550 aa17.07■□□□□ 0.32
HLA-DQB1-204ENST00000399084 CALRP27797 417 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PBLDP30039 288 aaPredicted RBP17.07■□□□□ 0.32
HLA-DQB1-204ENST00000399084 KDELR2P33947 212 aa17.07■□□□□ 0.32
HLA-DQB1-204ENST00000399084 P2RY2P41231 377 aa17.07■□□□□ 0.32
HLA-DQB1-204ENST00000399084 CDKN2CP42773 168 aa17.07■□□□□ 0.32
HLA-DQB1-204ENST00000399084 HLCSP50747 726 aa17.07■□□□□ 0.32
HLA-DQB1-204ENST00000399084 RAE1P78406 368 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TOP3AQ13472 1001 aaPredicted RBP17.07■□□□□ 0.32
HLA-DQB1-204ENST00000399084 DDX39BQ13838 428 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB1-204ENST00000399084 PNCKQ6P2M8 343 aa17.07■□□□□ 0.32
HLA-DQB1-204ENST00000399084 TBPL2Q6SJ96 375 aa17.07■□□□□ 0.32
HLA-DQB1-204ENST00000399084 EIF3MQ7L2H7 374 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms