RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 OR51F1A6NGY5 319 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 H0YGG7 62 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 OR1I1O60431 355 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 NRP2O60462 931 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 PHF2O75151 1096 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 ZNF189O75820 626 aaPredicted RBP8.89□□□□□ -0.99
NEDD9-203ENST00000397378 EIF2S1P05198 315 aaKnown RBP8.89□□□□□ -0.99
NEDD9-203ENST00000397378 CYC1P08574 325 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 RBP3P10745 1247 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 TPH1P17752 444 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 PSMB5P28074 263 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 PTGS2P35354 604 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 KIR2DL3P43628 341 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 DLX5P56178 289 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 COPS2P61201 443 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 ARF3P61204 181 aaPredicted RBP8.89□□□□□ -0.99
NEDD9-203ENST00000397378 POU6F1Q14863 301 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 ACER2Q5QJU3 275 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 FBXO42Q6P3S6 717 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 TTC23LQ6PF05 361 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 FGD2Q7Z6J4 655 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 SIAH3Q8IW03 269 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 BEST3Q8N1M1 668 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 VWA5B2Q8N398 1253 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 TMEM178AQ8NBL3 297 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 OR8K1Q8NGG5 319 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 FAM57AQ8TBR7 257 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 SEC16BQ96JE7 1060 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 GBP4Q96PP9 640 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 SIGLEC12Q96PQ1 595 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 TTC1Q99614 292 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 MIPEPQ99797 713 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 YIPF2Q9BWQ6 316 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 TSSK1BQ9BXA7 367 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 HEMGNQ9BXL5 484 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 DMRT3Q9NQL9 472 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 SPTLC3Q9NUV7 552 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 ANKRD10Q9NXR5 420 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 STOX2Q9P2F5 926 aaPredicted RBP8.89□□□□□ -0.99
NEDD9-203ENST00000397378 TRPS1Q9UHF7 1281 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 EFR3BQ9Y2G0 817 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.89□□□□□ -0.99
NEDD9-203ENST00000397378 MRFAP1Q9Y605 127 aa8.89□□□□□ -0.99
NEDD9-203ENST00000397378 HRNRQ86YZ3 2850 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-203ENST00000397378 A0A1W2PPV9 198 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 CCDC162PA2VCL2 907 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 A6NNC1 897 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 USP27XA6NNY8 438 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 A8MUI8 341 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 GOLGA6L22H0YM25 854 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 CDK2AP1O14519 115 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 FFAR3O14843 346 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 GPR42O15529 346 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 ARHGEF9O43307 516 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 FOXS1O43638 330 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 CRLF1O75462 422 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 F12P00748 615 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-203ENST00000397378 APOA4P06727 396 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 ANXA5P08758 320 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 C8orf89P0DMQ9 161 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 CD46P15529 392 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 ZNF24P17028 368 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 AOAHP28039 575 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 PTGER1P34995 402 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 CD96P40200 585 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 MARCKSL1P49006 195 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 ST13P50502 369 aaKnown RBP8.88□□□□□ -0.99
NEDD9-203ENST00000397378 EFNA3P52797 238 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 EIF3EP60228 445 aaKnown RBP8.88□□□□□ -0.99
NEDD9-203ENST00000397378 DCAF7P61962 342 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 TPM4P67936 248 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 PMPCAQ10713 525 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 TUBA3CQ13748 450 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 FAM53BQ14153 422 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 MEP1AQ16819 746 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 PARP6Q2NL67 630 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 Q5PR19 223 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 CCDC181Q5TID7 509 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 TUBA3EQ6PEY2 450 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 DARS2Q6PI48 645 aaKnown RBP8.88□□□□□ -0.99
NEDD9-203ENST00000397378 GALNTL5Q7Z4T8 443 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 CPEB2Q7Z5Q1 589 aaKnown RBP8.88□□□□□ -0.99
NEDD9-203ENST00000397378 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-203ENST00000397378 ZC3H7AQ8IWR0 971 aaKnown RBP8.88□□□□□ -0.99
NEDD9-203ENST00000397378 RPRMLQ8N4K4 120 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 ARHGEF39Q8N4T4 335 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 RAB42Q8N4Z0 105 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 AMER2Q8N7J2 671 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 LKAAEAR1Q8TD35 194 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 METTL21AQ8WXB1 218 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 MMABQ96EY8 250 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-203ENST00000397378 CCDC42Q96M95 316 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 UTP23Q9BRU9 249 aaKnown RBP8.88□□□□□ -0.99
NEDD9-203ENST00000397378 DPH7Q9BTV6 452 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 DRC3Q9H069 523 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 LRRC40Q9H9A6 602 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 ZNHIT6Q9NWK9 470 aaKnown RBP8.88□□□□□ -0.99
NEDD9-203ENST00000397378 CRIM1Q9NZV1 1036 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 GNPTGQ9UJJ9 305 aa8.88□□□□□ -0.99
NEDD9-203ENST00000397378 RUVBL1Q9Y265 456 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms