RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 LOC105369274A0A096LPK9 316 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 LOC102723532A0A0G2JNH3 316 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 COPEO14579 308 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 PVRP15151 417 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 EEF1DP29692 281 aaKnown RBP10.13□□□□□ -0.79
NUP98-205ENST00000397007 CCT5P48643 541 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 MAGOHP61326 146 aaKnown RBP10.13□□□□□ -0.79
NUP98-205ENST00000397007 DOC2AQ14183 400 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 ADNP2Q6IQ32 1131 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 KLC3Q6P597 504 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 OR4N4Q8N0Y3 316 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.13□□□□□ -0.79
NUP98-205ENST00000397007 FOXS1O43638 330 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 CDH1P12830 882 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 CCL4P13236 92 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 MAP4P27816 1152 aaKnown RBP10.13□□□□□ -0.79
NUP98-205ENST00000397007 PFKFB4Q16877 469 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 C10orf62Q5T681 223 aaPredicted RBP10.13□□□□□ -0.79
NUP98-205ENST00000397007 MARCH9Q86YJ5 346 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 ZNF740Q8NDX6 193 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 CFAP61Q8NHU2 1237 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 NCSTNQ92542 709 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 CNDP1Q96KN2 507 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 DPH7Q9BTV6 452 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 TUBB1Q9H4B7 451 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 KNL1Q8NG31 2342 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 TMEM120BA0PK00 339 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 SRPX2O60687 465 aaPredicted RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 SNUPNO95149 360 aaKnown RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 CPA3P15088 417 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 PIK3CBP42338 1070 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 SERPINB4P48594 390 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 TBL3Q12788 808 aaKnown RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 PWP1Q13610 501 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 PDSS2Q86YH6 399 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 LRRC34Q8IZ02 419 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 RCBTB1Q8NDN9 531 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 SNIP1Q8TAD8 396 aaKnown RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 SNRNP27Q8WVK2 155 aaKnown RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 GBP5Q96PP8 586 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 FAM111AQ96PZ2 611 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 MECRQ9BV79 373 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 MRPS30Q9NP92 439 aaKnown RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 FOXJ2Q9P0K8 574 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 LNPEPQ9UIQ6 1025 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 SNX7Q9UNH6 387 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 TMEM114B3SHH9 223 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 ZNF28P17035 718 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 VARSP26640 1264 aaKnown RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 CMPK1P30085 196 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 MRPL19P49406 292 aaKnown RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 RPS15AP62244 130 aaKnown RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 CLCQ05315 142 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 CACHD1Q5VU97 1274 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 USP53Q70EK8 1073 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 RPS27LQ71UM5 84 aaKnown RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.12□□□□□ -0.79
NUP98-205ENST00000397007 ESAMQ96AP7 390 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 SMC6Q96SB8 1091 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 ZPBPQ9BS86 351 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 TRMOQ9BU70 441 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 APMAPQ9HDC9 416 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 SATB2Q9UPW6 733 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 LOXL2Q9Y4K0 774 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 PCDHGA6Q9Y5G7 932 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 VSTM2BA6NLU5 285 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 SPAG7O75391 227 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 ESRRBO95718 433 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 GUCA1CO95843 209 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 HIST1H2AGP0C0S8 130 aaPredicted RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 KRT15P19012 456 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 HIST1H2ADP20671 130 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 CCR10P46092 362 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 KCNAB1Q14722 419 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 KIAA0040Q15053 153 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 RHBDD2Q6NTF9 364 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 MRPL14Q6P1L8 145 aaKnown RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 CLNKQ7Z7G1 428 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 SHISA5Q8N114 240 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 AMER3Q8N944 861 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 KDF1Q8NAX2 398 aaPredicted RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 ZNF473Q8WTR7 871 aaKnown RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 MAELQ96JY0 434 aaKnown RBP10.12□□□□□ -0.79
NUP98-205ENST00000397007 HIST1H2AHQ96KK5 128 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 HIST1H2AJQ99878 128 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 ZFYVE21Q9BQ24 234 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 H2AFJQ9BTM1 129 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 MS4A8Q9BY19 250 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 TRIM54Q9BYV2 358 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 SLC29A3Q9BZD2 475 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 POLR1BQ9H9Y6 1135 aa10.12□□□□□ -0.79
NUP98-205ENST00000397007 CNOT3O75175 753 aaKnown RBP10.11□□□□□ -0.79
NUP98-205ENST00000397007 CLEC3AO75596 197 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 WDR47O94967 919 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 ETHE1O95571 254 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 ACPPP15309 386 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 GNAZP19086 355 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 CD82P27701 267 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 PIK3CGP48736 1102 aa10.11□□□□□ -0.79
NUP98-205ENST00000397007 CCR8P51685 355 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms