RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 VEZF1Q14119 521 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 PLEKHG6Q3KR16 790 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 C7orf34Q96L11 122 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 MCCC1Q96RQ3 725 aaPredicted RBP18.23■□□□□ 0.51
CBX1-202ENST00000393408 SLIRPQ9GZT3 109 aaKnown RBP18.23■□□□□ 0.51
CBX1-202ENST00000393408 KIAA1522Q9P206 1035 aaPredicted RBP18.23■□□□□ 0.51
CBX1-202ENST00000393408 TTC34A8MYJ7 566 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 LCKP06239 509 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 RXRGP48443 463 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 AP1S2P56377 157 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 C21orf58P58505 322 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 CD300CQ08708 224 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 PLEKHS1Q5SXH7 462 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 RPL3LQ92901 407 aaKnown RBP18.23■□□□□ 0.51
CBX1-202ENST00000393408 LGALS12Q96DT0 336 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 PSD2Q9BQI7 771 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 PCDHB11Q9Y5F2 797 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 SCN5AQ14524 2016 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 PRRG1O14668 218 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 C1SP09871 688 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 LAMP1P11279 417 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 SRCP12931 536 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 CTSOP43234 321 aaPredicted RBP18.22■□□□□ 0.51
CBX1-202ENST00000393408 STK19P49842 368 aaPredicted RBP18.22■□□□□ 0.51
CBX1-202ENST00000393408 CRYBA2P53672 197 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 SNRPD1P62314 119 aaKnown RBP18.22■□□□□ 0.51
CBX1-202ENST00000393408 CAMK2GQ13555 558 aaPredicted RBP18.22■□□□□ 0.51
CBX1-202ENST00000393408 UBE2UQ5VVX9 321 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 AHSA2Q719I0 299 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 ENTHD1Q8IYW4 607 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 EPYCQ99645 322 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 BBS2Q9BXC9 721 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 CHST8Q9H2A9 424 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 SUV39H2Q9H5I1 410 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 TPT1P8Q9HAU6 139 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 VPS29Q9UBQ0 182 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 OSGIN1Q9UJX0 560 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 BTBD3Q9Y2F9 522 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 CLDN24A6NM45 220 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 ALOX5P09917 674 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 CD36P16671 472 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 KCNJ10P78508 379 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 IRF8Q02556 426 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 ZNF33BQ06732 778 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 LIPJQ5W064 366 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 SERPINA13PQ6UXR4 307 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 FIBINQ8TAL6 211 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 WDR20Q8TBZ3 569 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 TPD52L3Q96J77 140 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 GABARAPL3Q9BY60 117 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 IL21Q9HBE4 155 aa18.22■□□□□ 0.51
CBX1-202ENST00000393408 RUVBL1Q9Y265 456 aaKnown RBP18.22■□□□□ 0.51
CBX1-202ENST00000393408 UGDHO60701 494 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 NUDT7P0C024 238 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 ATP1B2P14415 290 aaPredicted RBP18.21■□□□□ 0.51
CBX1-202ENST00000393408 NEK10Q6ZWH5 1172 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 DNASE1L2Q92874 299 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 SH3KBP1Q96B97 665 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 HRASLS5Q96KN8 279 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 SPATA9Q9BWV2 254 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 PCDH12Q9NPG4 1184 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 SPATA6Q9NWH7 488 aaPredicted RBP18.21■□□□□ 0.51
CBX1-202ENST00000393408 LSM7Q9UK45 103 aaKnown RBP18.21■□□□□ 0.51
CBX1-202ENST00000393408 PCDHGA6Q9Y5G7 932 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 BNIP3LO60238 219 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 TGFBR1P36897 503 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 SPINT3P49223 89 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 LHX8Q68G74 356 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 RASGRP3Q8IV61 690 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 BBS7Q8IWZ6 715 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 CADM3Q8N126 398 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 CDC26Q8NHZ8 85 aa18.21■□□□□ 0.51
CBX1-202ENST00000393408 C11orf24Q96F05 449 aaPredicted RBP18.21■□□□□ 0.51
CBX1-202ENST00000393408 CSNK2BP67870 215 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 SF1Q15637 639 aaKnown RBP18.2■□□□□ 0.5
CBX1-202ENST00000393408 MPPE1Q53F39 396 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 MPP7Q5T2T1 576 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 AGAP7PQ5VUJ5 663 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 PLEKHG7Q6ZR37 379 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 CPXM2Q8N436 756 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 MTERF1Q99551 399 aaKnown RBP18.2■□□□□ 0.5
CBX1-202ENST00000393408 DUSP26Q9BV47 211 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 EPS8L2Q9H6S3 715 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 FZD4Q9ULV1 537 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 RNF6Q9Y252 685 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 C1orf226A1L170 272 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 EFCAB9A8MZ26 197 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 TMEM229AB2RXF0 380 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 SCAMP2O15127 329 aaKnown RBP18.2■□□□□ 0.5
CBX1-202ENST00000393408 SOD2P04179 222 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 EPHB3P54753 998 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 DNASE1L3Q13609 305 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 XKR6Q5GH73 641 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 CATSPEREQ5SY80 951 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 ZDHHC20Q5W0Z9 365 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 PAGE2Q7Z2X7 111 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 FAM124AQ86V42 546 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 PLD3Q8IV08 490 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 SLC38A4Q969I6 547 aa18.2■□□□□ 0.5
CBX1-202ENST00000393408 ITPAQ9BY32 194 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms