RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 GUCA1CO95843 209 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 CDH1P12830 882 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 NPPBP16860 134 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 CRABP2P29373 138 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 CCR8P51685 355 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 NFKB2Q00653 900 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 DSG2Q14126 1118 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 SLC9A5Q14940 896 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 SLMAPQ14BN4 828 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 TSNQ15631 228 aaKnown RBP12.08□□□□□ -0.48
GGPS1-203ENST00000391855 NKG7Q16617 165 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 MRGPREQ86SM8 312 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 KLHDC8AQ8IYD2 350 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 CAMKVQ8NCB2 501 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 SLC5A11Q8WWX8 675 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 FER1L6-AS2Q96M78 137 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 ACSS3Q9H6R3 686 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 CAB39LQ9H9S4 337 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 SLC22A11Q9NSA0 550 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 NINJ2Q9NZG7 142 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 TLK1Q9UKI8 766 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 IKZF3Q9UKT9 509 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 RUVBL1Q9Y265 456 aaKnown RBP12.08□□□□□ -0.48
GGPS1-203ENST00000391855 HEMK1Q9Y5R4 338 aaPredicted RBP12.08□□□□□ -0.48
GGPS1-203ENST00000391855 KCNE2Q9Y6J6 123 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 HEATR5BQ9P2D3 2071 aa12.08□□□□□ -0.48
GGPS1-203ENST00000391855 C2orf72A6NCS6 295 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 ARGFXA6NJG6 315 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 SLC35G6P0C7Q6 338 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 CCDC166P0CW27 439 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 CD1DP15813 335 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 FBLP22087 321 aaKnown RBP12.07□□□□□ -0.48
GGPS1-203ENST00000391855 OTX2P32243 289 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 OR1D4P47884 311 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 AVPR1BP47901 424 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 OCA2Q04671 838 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 CSHL1Q14406 222 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 TGFBIQ15582 683 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 LACTB2Q53H82 288 aaPredicted RBP12.07□□□□□ -0.48
GGPS1-203ENST00000391855 TCTN3Q6NUS6 607 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 RAPH1Q70E73 1250 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 COX15Q7KZN9 410 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 TAOK1Q7L7X3 1001 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 TBC1D1Q86TI0 1168 aaPredicted RBP12.07□□□□□ -0.48
GGPS1-203ENST00000391855 ASPGQ86U10 573 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 IFT20Q8IY31 132 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 OR4K1Q8NGD4 311 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 IFT81Q8WYA0 676 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 COL26A1Q96A83 441 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 PYCR2Q96C36 320 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 UBXN10Q96LJ8 280 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 SPSB2Q99619 263 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 CAPS2Q9BXY5 557 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 DRC3Q9H069 523 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 CDC42EP4Q9H3Q1 356 aaKnown RBP12.07□□□□□ -0.48
GGPS1-203ENST00000391855 CNOT10Q9H9A5 744 aaKnown RBP12.07□□□□□ -0.48
GGPS1-203ENST00000391855 PELI2Q9HAT8 420 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 C14orf105Q9NVL8 296 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 ZNF282Q9UDV7 671 aaPredicted RBP12.07□□□□□ -0.48
GGPS1-203ENST00000391855 PCDHGB7Q9Y5F8 929 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 PCDHGA9Q9Y5G4 932 aaKnown RBP12.07□□□□□ -0.48
GGPS1-203ENST00000391855 COL6A6A6NMZ7 2263 aa12.07□□□□□ -0.48
GGPS1-203ENST00000391855 IGLV3-12A0A075B6K2 115 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 TRBC2A0A5B9 178 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 VSTM2BA6NLU5 285 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 H0YIG0 161 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 PCDH17O14917 1159 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 SNPHO15079 494 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 CNOT3O75175 753 aaKnown RBP12.06□□□□□ -0.48
GGPS1-203ENST00000391855 S100BP04271 92 aaPredicted RBP12.06□□□□□ -0.48
GGPS1-203ENST00000391855 MMP11P24347 488 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 ECHS1P30084 290 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 SKP1P63208 163 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 NFATC3Q12968 1075 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 ATP1A4Q13733 1029 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 EFTUD2Q15029 972 aaKnown RBP eCLIP12.06□□□□□ -0.487e-7■□□□□ 9.7
GGPS1-203ENST00000391855 ZXDCQ2QGD7 858 aaPredicted RBP12.06□□□□□ -0.48
GGPS1-203ENST00000391855 HKDC1Q2TB90 917 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 NIPAL1Q6NVV3 410 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 VN1R4Q7Z5H5 301 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 ZNF605Q86T29 641 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 THOC6Q86W42 341 aaKnown RBP12.06□□□□□ -0.48
GGPS1-203ENST00000391855 HPS6Q86YV9 775 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 PLD3Q8IV08 490 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 CNPY4Q8N129 248 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 ARHGEF39Q8N4T4 335 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 MFSD9Q8NBP5 474 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 KIAA1191Q96A73 305 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 RHBDF1Q96CC6 855 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 ABHD17AQ96GS6 310 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 OR4K3Q96R72 315 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 AIF1LQ9BQI0 150 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 ING2Q9H160 280 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 NMRAL1Q9HBL8 299 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 SEMA3GQ9NS98 782 aa12.06□□□□□ -0.48
GGPS1-203ENST00000391855 A0A087X1B8 175 aa12.05□□□□□ -0.48
GGPS1-203ENST00000391855 P2RX6O15547 441 aa12.05□□□□□ -0.48
GGPS1-203ENST00000391855 CEACAM4O75871 244 aa12.05□□□□□ -0.48
GGPS1-203ENST00000391855 MED26O95402 600 aa12.05□□□□□ -0.48
GGPS1-203ENST00000391855 NSA2O95478 260 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms