RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 MAGEB10Q96LZ2 347 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 DCLRE1CQ96SD1 692 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 HBEGFQ99075 208 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 ASPNQ9BXN1 380 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 ING3Q9NXR8 418 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 SAMHD1Q9Y3Z3 626 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 MRPL42Q9Y6G3 142 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 MICAL3Q7RTP6 2002 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 NCF1BA6NI72 391 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 NCF1CA8MVU1 366 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 GABRDO14764 452 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 PRLP01236 227 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 FHP07954 510 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 CNPP09543 421 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 NCF1P14598 390 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 CFL1P23528 166 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 ERVPABLB-1P60509 514 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 B2MP61769 119 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 ST3GAL4Q11206 333 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 ZNF267Q14586 743 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 AP5B1Q2VPB7 878 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 SAXO2Q658L1 398 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 KRT73Q86Y46 540 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 UBE2J2Q8N2K1 259 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 LINC00469Q8N7U9 141 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 ESAMQ96AP7 390 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 FAM120BQ96EK7 910 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 CDK15Q96Q40 435 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 OR5M11Q96RB7 305 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 PAAF1Q9BRP4 392 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 GABARAPL3Q9BY60 117 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 ATP13A1Q9HD20 1204 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 EVA1BQ9NVM1 165 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 ELF5Q9UKW6 265 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 DERAQ9Y315 318 aa14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 LAMA2P24043 3122 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-201ENST00000389386 YJEFN3A6XGL0 299 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 CDC7O00311 574 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 HOXB8P17481 243 aaPredicted RBP14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 BRCC3P46736 316 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 IKZF1Q13422 519 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 PTGR1Q14914 329 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 NR6A1Q15406 480 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 PLEKHM3Q6ZWE6 761 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 ZNF367Q7RTV3 350 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 C9orf62Q8N4C0 152 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 FUBP1Q96AE4 644 aaKnown RBP14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 ZBTB18Q99592 522 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 MGLLQ99685 303 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 CNPPD1Q9BV87 410 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 SPATA9Q9BWV2 254 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 DERL2Q9GZP9 239 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 TKTL2Q9H0I9 626 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 ASB1Q9Y576 335 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 KCTD3Q9Y597 815 aa14.21□□□□□ -0.14
VPS9D1-201ENST00000389386 CIB4A0PJX0 185 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 KLK8O60259 260 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 SLC2A3P11169 496 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 CCND3P30281 292 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 GGT2P36268 569 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 MAP3K7CLP57077 242 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 CACNB2Q08289 660 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 OR4F3Q6IEY1 312 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 PAQR3Q6TCH7 311 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 IL27RAQ6UWB1 636 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 MAMSTRQ6ZN01 415 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 ANKS3Q6ZW76 656 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 B3GALNT2Q8NCR0 500 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 OR52B6Q8NGF0 335 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 KCTD13Q8WZ19 329 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 PGAP3Q96FM1 320 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 MSANTD3Q96H12 275 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 KCNC2Q96PR1 638 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 MED10Q9BTT4 135 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 WDCPQ9H6R7 721 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 TAS2R16Q9NYV7 291 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 SAMD4AQ9UPU9 718 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 HAS3O00219 553 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 GFRA2O00451 464 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 TSPAN4O14817 238 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 PDE9AO76083 593 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 FOSL1P15407 271 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 CPT1AP50416 773 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 PER3P56645 1201 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 VLDLRP98155 873 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 DSC3Q14574 896 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 VEPH1Q14D04 833 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 EIF4HQ15056 248 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 SSX1Q16384 188 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 SPANXN4Q5MJ08 99 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 FAM131AQ6UXB0 335 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 EFHBQ8N7U6 833 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 ENKURQ8TC29 256 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 ZNF382Q96SR6 550 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 CPPED1Q9BRF8 314 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 RAD18Q9NS91 495 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 TNFRSF10DQ9UBN6 386 aa14.2□□□□□ -0.14
VPS9D1-201ENST00000389386 ZNF236Q9UL36 1845 aa14.19□□□□□ -0.14
VPS9D1-201ENST00000389386 CASTOR2A6NHX0 329 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms