RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 PBLDP30039 288 aaPredicted RBP11.45□□□□□ -0.58
NPHP4-202ENST00000378161 OMPP47874 163 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 MAPKAPK3Q16644 382 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 EXOC3L2Q2M3D2 409 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 ZMAT1Q5H9K5 638 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 FAM171A1Q5VUB5 890 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 OR4Q3Q8NH05 313 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 JOSD2Q8TAC2 188 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 C11orf24Q96F05 449 aaPredicted RBP11.45□□□□□ -0.58
NPHP4-202ENST00000378161 NTPCRQ9BSD7 190 aaKnown RBP11.45□□□□□ -0.58
NPHP4-202ENST00000378161 GLIS2Q9BZE0 524 aaPredicted RBP11.45□□□□□ -0.58
NPHP4-202ENST00000378161 CACYBPQ9HB71 228 aaKnown RBP11.45□□□□□ -0.58
NPHP4-202ENST00000378161 PADI2Q9Y2J8 665 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 CARNS1A5YM72 827 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 LYRM1O43325 122 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 TWF1Q12792 350 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 CYB5R2Q6BCY4 276 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 ELP2Q6IA86 826 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 SPRED1Q7Z699 444 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 KCNMB4Q86W47 210 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 TMEM132CQ8N3T6 1108 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 Q8N402 240 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 KDF1Q8NAX2 398 aaPredicted RBP11.45□□□□□ -0.58
NPHP4-202ENST00000378161 MOSPD2Q8NHP6 518 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 SNRNP25Q9BV90 132 aaKnown RBP11.45□□□□□ -0.58
NPHP4-202ENST00000378161 REEP1Q9H902 201 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 ACSS2Q9NR19 701 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 SLC22A11Q9NSA0 550 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 LRRC14BA6NHZ5 514 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 RRN3P2A6NIE6 340 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 WNT10BO00744 389 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 CASKO14936 926 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 HCN1O60741 890 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 PAK4O96013 591 aaPredicted RBP11.45□□□□□ -0.58
NPHP4-202ENST00000378161 TPOP07202 933 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 MYL3P08590 195 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 POLR2IP36954 125 aaKnown RBP11.45□□□□□ -0.58
NPHP4-202ENST00000378161 EPHA5P54756 1037 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 CASP6P55212 293 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 YWHAZP63104 245 aaKnown RBP11.45□□□□□ -0.58
NPHP4-202ENST00000378161 CXCL9Q07325 125 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 CAPSQ13938 189 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 EML3Q32P44 896 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 KDELC1Q6UW63 502 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 ASB18Q6ZVZ8 466 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 OR6J1Q8NGC5 347 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 CHAC2Q8WUX2 184 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 COQ8BQ96D53 544 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 PABPC5Q96DU9 382 aaKnown RBP11.45□□□□□ -0.58
NPHP4-202ENST00000378161 AMBNQ9NP70 447 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 SARS2Q9NP81 518 aaKnown RBP11.45□□□□□ -0.58
NPHP4-202ENST00000378161 KIF25Q9UIL4 384 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 NUP188Q5SRE5 1749 aa11.45□□□□□ -0.58
NPHP4-202ENST00000378161 TRABD2BA6NFA1 517 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 CXorf49A8MYA2 514 aaPredicted RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 VPS26AO75436 327 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 BTF3P20290 206 aaKnown RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 SLC25A25Q6KCM7 469 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 SLITRK4Q8IW52 837 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 ZZZ3Q8IYH5 903 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 TEX19Q8NA77 164 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 C9orf43Q8TAL5 461 aaPredicted RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 ELMOD3Q96FG2 381 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 NLNQ9BYT8 704 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 A0A0A6YYJ9 748 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 ERI2A8K979 691 aaKnown RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 ARSBP15848 533 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 GSK3BP49841 420 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 BLOC1S1P78537 153 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 ACY1Q03154 408 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 RAB12Q6IQ22 244 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 KIAA1324Q6UXG2 1013 aaKnown RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 TSPAN33Q86UF1 283 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 FAM126BQ8IXS8 530 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 FAM120BQ96EK7 910 aaKnown RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 ARL6Q9H0F7 186 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 POMKQ9H5K3 350 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 GPN1Q9HCN4 374 aaPredicted RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 YARS2Q9Y2Z4 477 aaKnown RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 PTCH2Q9Y6C5 1203 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 PRMT5O14744 637 aaPredicted RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 PHYHO14832 338 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 URODP06132 367 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 SLC6A4P31645 630 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 ACSL1P33121 698 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 GP2P55259 537 aaKnown RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 HUNKP57058 714 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 RBBP7Q16576 425 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 FBXO47Q5MNV8 452 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 NBPF12Q5TAG4 269 aaPredicted RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 VN1R5Q7Z5H4 357 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 ARRDC4Q8NCT1 418 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 CERS2Q96G23 380 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 LRCH3Q96II8 777 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 COL21A1Q96P44 957 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 S100A13Q99584 98 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 HTATIP2Q9BUP3 242 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 C11orf54Q9H0W9 315 aaPredicted RBP11.44□□□□□ -0.58
NPHP4-202ENST00000378161 A0A1B0GTQ1 180 aa11.44□□□□□ -0.58
NPHP4-202ENST00000378161 PQLC2LA1A4F0 135 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms