RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 COQ6Q9Y2Z9 468 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 SAMHD1Q9Y3Z3 626 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 GMPPBQ9Y5P6 360 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 A0A1W2PQ67 120 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 GABRR3A8MPY1 467 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 TOR1BO14657 336 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 TGM5O43548 720 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 LILRB3O75022 631 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 MYCP01106 439 aaPredicted RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 CTSAP10619 480 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 C21orf58P58505 322 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 ITGADQ13349 1161 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 MAD2L1BPQ15013 274 aaPredicted RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 SYT6Q5T7P8 510 aaPredicted RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 ZDHHC20Q5W0Z9 365 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 PDE12Q6L8Q7 609 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 TSEN54Q7Z6J9 526 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 DDX53Q86TM3 631 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 THOC6Q86W42 341 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 CPA6Q8N4T0 437 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 OR2A12Q8NGT7 310 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 NDNFQ8TB73 568 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 RORBQ92753 470 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 RC3H2Q9HBD1 1191 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 RPS6KA6Q9UK32 745 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 HSPE1-MOB4S4R3N1 261 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 PMF1-BGLAPU3KQ54 211 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 CXorf51AA0A1B0GTR3 108 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 C1orf226A1L170 272 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 FADS2P1A8MWK0 482 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 UGDHO60701 494 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 SH3BGRLO75368 114 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 WBP4O75554 376 aaKnown RBP10.56□□□□□ -0.72
BEST1-201ENST00000378043 GCM2O75603 506 aaPredicted RBP10.56□□□□□ -0.72
BEST1-201ENST00000378043 FKBP9O95302 570 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 PARNO95453 639 aaKnown RBP10.56□□□□□ -0.72
BEST1-201ENST00000378043 MT-ND2P03891 347 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 PCSK2P16519 638 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 ALDH4A1P30038 563 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 ARHGDIAP52565 204 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 FAHD1Q6P587 224 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 ERICH5Q6P6B1 374 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 NEK10Q6ZWH5 1172 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 TSPYL5Q86VY4 417 aaPredicted RBP10.56□□□□□ -0.72
BEST1-201ENST00000378043 CDC26Q8NHZ8 85 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 MAL2Q969L2 176 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 SIGLEC11Q96RL6 698 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 AKIP1Q9NQ31 210 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 PCDHB11Q9Y5F2 797 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 DNAH14Q0VDD8 3507 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 PCDHGA12O60330 932 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 PSIP1O75475 530 aaKnown RBP10.56□□□□□ -0.72
BEST1-201ENST00000378043 GSTM1P09488 218 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 KRT20P35900 424 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 ETV3P41162 512 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 CCR3P51677 355 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 ITGA1P56199 1179 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 LSM3P62310 102 aaKnown RBP10.56□□□□□ -0.72
BEST1-201ENST00000378043 KCNJ10P78508 379 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 ACSM2AQ08AH3 577 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 GAB1Q13480 694 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 VEZF1Q14119 521 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 CLCA4Q14CN2 919 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 ACSM2BQ68CK6 577 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 GDPD4Q6W3E5 623 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 FAM124AQ86V42 546 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 SLAIN1Q8ND83 568 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 APH1BQ8WW43 257 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 ASZ1Q8WWH4 475 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 ZNF300Q96RE9 604 aaPredicted RBP10.56□□□□□ -0.72
BEST1-201ENST00000378043 DUSP26Q9BV47 211 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 BTBD2Q9BX70 525 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 FAM83DQ9H4H8 585 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 ARMC7Q9H6L4 198 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 RASSF1Q9NS23 344 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 TMEM184CQ9NVA4 438 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 THUMPD1Q9NXG2 353 aaKnown RBP10.56□□□□□ -0.72
BEST1-201ENST00000378043 SPG21Q9NZD8 308 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 FZD4Q9ULV1 537 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 EXO1Q9UQ84 846 aaKnown RBP10.56□□□□□ -0.72
BEST1-201ENST00000378043 RUVBL1Q9Y265 456 aaKnown RBP10.56□□□□□ -0.72
BEST1-201ENST00000378043 TPRKBQ9Y3C4 175 aa10.56□□□□□ -0.72
BEST1-201ENST00000378043 TRAV19A0A0A6YYK7 116 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 PABPN1LA6NDY0 278 aaKnown RBP10.55□□□□□ -0.72
BEST1-201ENST00000378043 CLDN25C9JDP6 229 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 H0YIV9 168 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 SCAMP2O15127 329 aaKnown RBP10.55□□□□□ -0.72
BEST1-201ENST00000378043 KPNA5O15131 536 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 CCR2P41597 374 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 CTSCP53634 463 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 VBP1P61758 197 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 RPP38P78345 283 aaKnown RBP10.55□□□□□ -0.72
BEST1-201ENST00000378043 PHEXP78562 749 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 DEFB103AP81534 67 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 CREMQ03060 361 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 RELAQ04206 551 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 NAE1Q13564 534 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 CYP2A13Q16696 494 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 RGS21Q2M5E4 152 aa10.55□□□□□ -0.72
BEST1-201ENST00000378043 KIAA1614Q5VZ46 1190 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms