RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 PIK3CGP48736 1102 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 SLC18A2Q05940 514 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 PCDH1Q08174 1060 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 BEND6Q5SZJ8 279 aaPredicted RBP12.66□□□□□ -0.38
CKAP2-202ENST00000378034 ATG9BQ674R7 924 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 LRIG3Q6UXM1 1119 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 TRABD2AQ86V40 505 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 OR4N4Q8N0Y3 316 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 TMEM151AQ8N4L1 468 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 ZNF655Q8N720 491 aaPredicted RBP12.66□□□□□ -0.38
CKAP2-202ENST00000378034 SNX31Q8N9S9 440 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 PROKR1Q8TCW9 393 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 AIF1LQ9BQI0 150 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 EFHD1Q9BUP0 239 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 NLNQ9BYT8 704 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 TMEM216Q9P0N5 145 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 GRID1Q9ULK0 1009 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 FRYQ5TBA9 3013 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 WDFY3Q8IZQ1 3526 aa12.66□□□□□ -0.38
CKAP2-202ENST00000378034 IGF2RP11717 2491 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 TK2O00142 265 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 KLK10O43240 276 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 EPB42P16452 691 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 KRT4P19013 534 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 RORAP35398 523 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 STAT5AP42229 794 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 AGTR2P50052 363 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 REEP5Q00765 189 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 ZNF844Q08AG5 666 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 TBCCQ15814 346 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 PRTGQ2VWP7 1150 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 MANEAQ5SRI9 462 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 CATSPEREQ5SY80 951 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 GARNL3Q5VVW2 1013 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 BROXQ5VW32 411 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 SLCO4C1Q6ZQN7 724 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 TMPRSS11BQ86T26 416 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 SPACA3Q8IXA5 215 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 DSELQ8IZU8 1212 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 IL22RA1Q8N6P7 574 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 CSNK1A1LQ8N752 337 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 MFSD9Q8NBP5 474 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 ESAMQ96AP7 390 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 WDR34Q96EX3 536 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 DCBLD2Q96PD2 775 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 NT5DC2Q9H857 520 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 LHX9Q9NQ69 397 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 TXLNGQ9NUQ3 528 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 MKS1Q9NXB0 559 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 SENP1Q9P0U3 644 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 PCDHGA4Q9Y5G9 962 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 MDC1Q14676 2089 aaKnown RBP12.65□□□□□ -0.38
CKAP2-202ENST00000378034 APC2O95996 2303 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 HYKKA2RU49 373 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 SRRM3A6NNA2 597 aaPredicted RBP12.65□□□□□ -0.38
CKAP2-202ENST00000378034 MEN1O00255 615 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 COPEO14579 308 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 KATNA1O75449 491 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 CTSBP07858 339 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 SBK3P0C264 359 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 AGXTP21549 392 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 GSTM2P28161 218 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 AHRP35869 848 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 CASP2P42575 452 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 UCNP55089 124 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 NFKB2Q00653 900 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 LAPTM5Q13571 262 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 E2F2Q14209 437 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 KRT71Q3SY84 523 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 CCDC153Q494R4 210 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 FBXO48Q5FWF7 155 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 PRAMEF17Q5VTA0 474 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 ZNF517Q6ZMY9 492 aaPredicted RBP12.65□□□□□ -0.38
CKAP2-202ENST00000378034 KRT78Q8N1N4 520 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 PTGR2Q8N8N7 351 aaPredicted RBP12.65□□□□□ -0.38
CKAP2-202ENST00000378034 SLC38A9Q8NBW4 561 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 CAMKVQ8NCB2 501 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 MYRIPQ8NFW9 859 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 KIAA1143Q96AT1 154 aaPredicted RBP12.65□□□□□ -0.38
CKAP2-202ENST00000378034 TM4SF19Q96DZ7 209 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 PTCD3Q96EY7 689 aaKnown RBP12.65□□□□□ -0.38
CKAP2-202ENST00000378034 NAF1Q96HR8 494 aaKnown RBP12.65□□□□□ -0.38
CKAP2-202ENST00000378034 SEC16BQ96JE7 1060 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 C17orf62Q9BQA9 187 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 EFCAB11Q9BUY7 163 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 CUTCQ9NTM9 273 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 COPG2Q9UBF2 871 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 ANGPTL3Q9Y5C1 460 aa12.65□□□□□ -0.38
CKAP2-202ENST00000378034 ACACAQ13085 2346 aa12.65□□□□□ -0.39
CKAP2-202ENST00000378034 C21orf140B9A014 251 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 DSCR3O14972 297 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 OR1F1O43749 312 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 EIF2S1P05198 315 aaKnown RBP12.64□□□□□ -0.39
CKAP2-202ENST00000378034 BCL6P41182 706 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 SCTRP47872 440 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 GPS2Q13227 327 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 TGIF1Q15583 401 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 ST3GAL2Q16842 350 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 MUM1Q2TAK8 710 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 PAGE2BQ5JRK9 111 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms