RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 SLCO4A1Q96BD0 722 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 ISOC1Q96CN7 298 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 ABHD8Q96I13 439 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 TMEM245Q9H330 911 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 MAGEL2Q9UJ55 1249 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 LYVE1Q9Y5Y7 322 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 TMEM189-UBE2V1I3L0A0 370 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 SUV39H1O43463 412 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 OR10H3O60404 316 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 ANGPTL1O95841 491 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 MAPK8P45983 427 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 TIAL1Q01085 375 aaKnown RBP eCLIP11.3□□□□□ -0.6
DDR1-227ENST00000376570 MXD1Q05195 221 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 EPS8Q12929 822 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 GPAT3Q53EU6 434 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 INO80DQ53TQ3 878 aaPredicted RBP11.3□□□□□ -0.6
DDR1-227ENST00000376570 TRAF7Q6Q0C0 670 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 CYHR1Q6ZMK1 362 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 NFKBIDQ8NI38 313 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 VPS35Q96QK1 796 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 TPT1P8Q9HAU6 139 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 A8MU76 341 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 FAM227AF5H4B4 570 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 C1SP09871 688 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 FSHRP23945 695 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 CAPGP40121 348 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 EMX2Q04743 252 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 TRAF3Q13114 568 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 IRF5Q13568 498 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 MED22Q15528 200 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 PYCR3Q53H96 274 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 SNAP47Q5SQN1 464 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 CCDC103Q8IW40 242 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 OR4N5Q8IXE1 308 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 OR2A12Q8NGT7 310 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 HUS1BQ8NHY5 278 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 CAPSLQ8WWF8 208 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 NEIL2Q969S2 332 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 NXPE3Q969Y0 559 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 ELAC1Q9H777 363 aaKnown RBP11.3□□□□□ -0.6
DDR1-227ENST00000376570 RC3H2Q9HBD1 1191 aaKnown RBP11.3□□□□□ -0.6
DDR1-227ENST00000376570 TMEM181Q9P2C4 612 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 BACE2Q9Y5Z0 518 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 SCN2AQ99250 2005 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 CEP250Q9BV73 2442 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 SLC28A2O43868 658 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 RASGRP1O95267 797 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 RYKP34925 604 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 RPS3AP61247 264 aaKnown RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 HIPK1Q86Z02 1210 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 ERI1Q8IV48 349 aaKnown RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 TNIP2Q8NFZ5 429 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 FAM210AQ96ND0 272 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 C17orf62Q9BQA9 187 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 PIKFYVEQ9Y2I7 2098 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 SCN3AQ9NY46 2000 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 H3BSH0 61 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 CH25HO95992 272 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 NR2F1P10589 423 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 TCEA1P23193 301 aaKnown RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 JAK1P23458 1154 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 AZGP1P25311 298 aaKnown RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 SLC19A1P41440 591 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 ARSFP54793 590 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 TBPL1P62380 186 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 MRPS15P82914 257 aaKnown RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 RPS26P11Q5JNZ5 115 aaPredicted RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 FAM26DQ5JW98 314 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 AFMIDQ63HM1 303 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 TYW3Q6IPR3 259 aaKnown RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 C17orf64Q86WR6 236 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 ZFAND4Q86XD8 727 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 RNF130Q86XS8 419 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 TMEM102Q8N9M5 508 aaPredicted RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 TFGQ92734 400 aaPredicted RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 HSH2DQ96JZ2 352 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 NDEL1Q9GZM8 345 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 RMI1Q9H9A7 625 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 CACYBPQ9HB71 228 aaKnown RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 PALMDQ9NP74 551 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 CCM2LQ9NUG4 571 aaPredicted RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 PLEKHM1Q9Y4G2 1056 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 LSM1O15116 133 aaKnown RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 SDC1P18827 310 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 HPCAL1P37235 193 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 MAPK12P53778 367 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 CLDN2P57739 230 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 PMS2P3Q13401 168 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 CLEC12AQ5QGZ9 265 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 PARS2Q7L3T8 475 aaKnown RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 DGLUCYQ7Z3D6 616 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 TMEM150AQ86TG1 271 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 TCEAL8Q8IYN2 117 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 TMEFF1Q8IYR6 380 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 RASGEF1AQ8N9B8 481 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 OR4E2Q8NGC2 313 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 PHF10Q8WUB8 498 aaKnown RBP11.29□□□□□ -0.6
DDR1-227ENST00000376570 NUS1Q96E22 293 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 TTTY10Q9BZA0 68 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 KCNK12Q9HB15 430 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms