RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 JUPP14923 745 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 SDC1P18827 310 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 VASPP50552 380 aaPredicted RBP13.53□□□□□ -0.24
MSH5-202ENST00000375740 IRF8Q02556 426 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 CCNYL2Q5T2Q4 361 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 THOC6Q86W42 341 aaKnown RBP13.53□□□□□ -0.24
MSH5-202ENST00000375740 PHACTR4Q8IZ21 702 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 AADATQ8N5Z0 425 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 ST13P5Q8NFI4 369 aaPredicted RBP13.53□□□□□ -0.24
MSH5-202ENST00000375740 OSCP1Q8WVF1 389 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 TMEM159Q96B96 161 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 ZFYVE19Q96K21 471 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 EGLN2Q96KS0 407 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 APOLD1Q96LR9 279 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 CCM2Q9BSQ5 444 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 SCHIP1Q9P0W5 487 aaPredicted RBP13.53□□□□□ -0.24
MSH5-202ENST00000375740 PPT2Q9UMR5 302 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 TMA7Q9Y2S6 64 aaKnown RBP13.53□□□□□ -0.24
MSH5-202ENST00000375740 PCDHB14Q9Y5E9 798 aa13.53□□□□□ -0.24
MSH5-202ENST00000375740 ATG13O75143 517 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 LRATO95237 230 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 AMD1P17707 334 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 CD22P20273 847 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 PSRC1Q6PGN9 363 aaPredicted RBP13.52□□□□□ -0.24
MSH5-202ENST00000375740 ZNF773Q6PK81 442 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 USP51Q70EK9 711 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 ANKRD13BQ86YJ7 626 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 ZNF548Q8NEK5 533 aaPredicted RBP13.52□□□□□ -0.24
MSH5-202ENST00000375740 PHOSPHO2Q8TCD6 241 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 WFIKKN2Q8TEU8 576 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 RAB2BQ8WUD1 216 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 CAPSLQ8WWF8 208 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 HERVK_113Q902F9 699 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 CCDC115Q96NT0 180 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 SH3GL1Q99961 368 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 TUBA1CQ9BQE3 449 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 FAM83CQ9BQN1 747 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 INPP5KQ9BT40 448 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 FUNDC2Q9BWH2 189 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 DGCR6LQ9BY27 220 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 ALOXE3Q9BYJ1 711 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 KCNH6Q9H252 994 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 GORASP2Q9H8Y8 452 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 AKIP1Q9NQ31 210 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 HPS4Q9NQG7 708 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 ANKMY1Q9P2S6 941 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 WARS2Q9UGM6 360 aaKnown RBP13.52□□□□□ -0.24
MSH5-202ENST00000375740 INVSQ9Y283 1065 aa13.52□□□□□ -0.24
MSH5-202ENST00000375740 MAGED1Q9Y5V3 778 aaPredicted RBP13.52□□□□□ -0.24
MSH5-202ENST00000375740 TRBV5-3A0A0A0MS03 114 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 SLC5A10A0PJK1 596 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 ANKRD34BA5PLL1 514 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 QSOX1O00391 747 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 HOXC11O43248 304 aaPredicted RBP13.52□□□□□ -0.25
MSH5-202ENST00000375740 MAN1A2O60476 641 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 B3GALT4O96024 378 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 GSNP06396 782 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 HLA-EP13747 358 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 IL7RP16871 459 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 PBLDP30039 288 aaPredicted RBP13.52□□□□□ -0.25
MSH5-202ENST00000375740 RPS9P46781 194 aaKnown RBP13.52□□□□□ -0.25
MSH5-202ENST00000375740 NAE1Q13564 534 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 KCNC3Q14003 757 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 ZNF846Q147U1 533 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 INAQ16352 499 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 XKR6Q5GH73 641 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 OTUD3Q5T2D3 398 aaPredicted RBP13.52□□□□□ -0.25
MSH5-202ENST00000375740 AGTRAPQ6RW13 159 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 CRTC3Q6UUV7 619 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 GCNT7Q6ZNI0 430 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 SLC16A12Q6ZSM3 486 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 ANKRD46Q86W74 232 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 EFHD2Q96C19 240 aaPredicted RBP13.52□□□□□ -0.25
MSH5-202ENST00000375740 BDH2Q9BUT1 245 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 TMEM106CQ9BVX2 250 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 CD320Q9NPF0 282 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 SERHLQ9NQF3 203 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 ADGRE2Q9UHX3 823 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 SLC27A6Q9Y2P4 619 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 RWDD3Q9Y3V2 267 aa13.52□□□□□ -0.25
MSH5-202ENST00000375740 SERTM1A2A2V5 107 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 C5orf67F2Z3F1 127 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 ADH1CP00326 375 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 PCNAP12004 261 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 HTR1BP28222 390 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 MAPK1P28482 360 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 PDHA2P29803 388 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 BDKRB1P46663 353 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 PRLHRP49683 370 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 ADARB1P78563 741 aaKnown RBP13.51□□□□□ -0.25
MSH5-202ENST00000375740 FAM98BQ52LJ0 330 aaKnown RBP13.51□□□□□ -0.25
MSH5-202ENST00000375740 LIPJQ5W064 366 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 NOXRED1Q6NXP6 359 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 NRSN1Q8IZ57 195 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 FAM86B1Q8N7N1 296 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 SMG7Q92540 1137 aaKnown RBP13.51□□□□□ -0.25
MSH5-202ENST00000375740 GLMNQ92990 594 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 MED8Q96G25 268 aa13.51□□□□□ -0.25
MSH5-202ENST00000375740 AURKBQ96GD4 344 aaPredicted RBP13.51□□□□□ -0.25
MSH5-202ENST00000375740 ADNPQ9H2P0 1102 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms