RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 KLHL3Q9UH77 587 aa13.68□□□□□ -0.22
CLCNKA-202ENST00000375692 VWA8A3KMH1 1905 aa13.68□□□□□ -0.22
CLCNKA-202ENST00000375692 ILVBLA1L0T0 632 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 ISPDA4D126 451 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 MTMR11A4FU01 709 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 FPGTO14772 594 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 ADAM12O43184 909 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 CLDN11O75508 207 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 SEMG1P04279 462 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 NUDT7P0C024 238 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 SYN1P17600 705 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 MZF1P28698 734 aaPredicted RBP13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 GKP32189 559 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 BMPR1AP36894 532 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 CYP4F2P78329 520 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 SF1Q15637 639 aaKnown RBP13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 ZNF181Q2M3W8 571 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 PTOV1Q86YD1 416 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 P3H2Q8IVL5 708 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 IPCEF1Q8WWN9 437 aaPredicted RBP13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 ATL1Q8WXF7 558 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 TM6SF2Q9BZW4 377 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 REXO4Q9GZR2 422 aaKnown RBP13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 ELOVL6Q9H5J4 265 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 MARCH7Q9H992 704 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 IL26Q9NPH9 171 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 TMEM184CQ9NVA4 438 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 K7ERQ8 282 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 HOXA2O43364 376 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 ASNA1O43681 348 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 SSX4O60224 188 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 ATP5C1P36542 298 aaKnown RBP13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 CTSKP43235 329 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 NFATC2Q13469 925 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 SPOUT1Q5T280 376 aaKnown RBP13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 CERS6Q6ZMG9 384 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 GDPD3Q7L5L3 318 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 UBE2Q1Q7Z7E8 422 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 SERPINA11Q86U17 422 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 RAVER1Q8IY67 606 aaKnown RBP13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 CLECL1Q8IZS7 167 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 RBFAQ8N0V3 343 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 METTL4Q8N3J2 472 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 DNAJB8Q8NHS0 232 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 CDC26Q8NHZ8 85 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 BADQ92934 168 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 Q96MT0 163 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 TTPALQ9BTX7 342 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 TP63Q9H3D4 680 aaPredicted RBP13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 TPK1Q9H3S4 243 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 RMI1Q9H9A7 625 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 CXXC1Q9P0U4 656 aaPredicted RBP13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 SPATA7Q9P0W8 599 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 LHX3Q9UBR4 397 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 DNMT3LQ9UJW3 386 aa13.67□□□□□ -0.22
CLCNKA-202ENST00000375692 CEP290O15078 2479 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 ABHD14A-ACY1A0A1B0GW23 586 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 YY2O15391 372 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 ZDHHC11BP0C7U3 371 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 TUBA1BP68363 451 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 MRPL58Q14197 206 aaKnown RBP13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 TTLL9Q3SXZ7 439 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 CXorf57Q6NSI4 855 aaKnown RBP13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 FAHD1Q6P587 224 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 TUBA1AQ71U36 451 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 CCDC103Q8IW40 242 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 NLGN4XQ8N0W4 816 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 CHCHD4Q8N4Q1 142 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 PAF1Q8N7H5 531 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 CELF2-AS1Q8N7Q2 184 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 BHMTQ93088 406 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 CLSTN3Q9BQT9 956 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 CENPOQ9BU64 300 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 MRPL9Q9BYD2 267 aaKnown RBP13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 ARL15Q9NXU5 204 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 GPR83Q9NYM4 423 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 IFT52Q9Y366 437 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 TESMINQ9Y4I5 508 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 M0R129 80 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 TAF4O00268 1085 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 TLL1O43897 1013 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 FZD6O60353 706 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 CLDN7O95471 211 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 CORO1AP31146 461 aaKnown RBP13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 UGT2B10P36537 528 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 CASP3P42574 277 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 KIR3DL1P43629 444 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 RPIAP49247 311 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 RHOAP61586 193 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 FOXD4Q12950 439 aaPredicted RBP13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 CCBE1Q6UXH8 406 aaPredicted RBP13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 GGHQ92820 318 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 MAL2Q969L2 176 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 PITX2Q99697 317 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 PSORS1C1Q9UIG5 152 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 RPS6KA6Q9UK32 745 aa13.66□□□□□ -0.22
CLCNKA-202ENST00000375692 A0A1W2PQ67 120 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 STSP08842 583 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 PRPS2P11908 318 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms