RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 ZNF347Q96SE7 839 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 PKP4Q99569 1192 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 CIB1Q99828 191 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 AIF1LQ9BQI0 150 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 CPPED1Q9BRF8 314 aaPredicted RBP8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 DUSP26Q9BV47 211 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 ADI1Q9BV57 179 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 TRMT61BQ9BVS5 477 aaKnown RBP8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 TRIT1Q9H3H1 467 aaKnown RBP8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 REEP4Q9H6H4 257 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 RPF2Q9H7B2 306 aaKnown RBP8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 MVB12BQ9H7P6 319 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 PREBQ9HCU5 417 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 MYNNQ9NPC7 610 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 WASH6PQ9NQA3 447 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 PRSS16Q9NQE7 514 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 SERHLQ9NQF3 203 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 AASDHPPTQ9NRN7 309 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 VAPAQ9P0L0 249 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 EGFL7Q9UHF1 273 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNHIT2Q9UHR6 403 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 CD84Q9UIB8 345 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 VPS4AQ9UN37 437 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 PLXNB3Q9ULL4 1909 aa8.42□□□□□ -1.06
SNRNP40-202ENST00000373720 G3V2T6 193 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 H3BNH8 94 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 CLIC1O00299 241 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 GNGT2O14610 69 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 TIPRLO75663 272 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 SOD1P00441 154 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 EPHX1P07099 455 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 ANXA4P09525 319 aaPredicted RBP8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 LINGO3P0C6S8 592 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 UBTFL6P0CB48 400 aaPredicted RBP8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 COX7A2P14406 83 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 CD1EP15812 388 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 FCARP24071 287 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 MSX2P35548 267 aaPredicted RBP8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 P2RY2P41231 377 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 ANXA11P50995 505 aaKnown RBP8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 LBX1P52954 281 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 ARSFP54793 590 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 SGCGQ13326 291 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 TUBA3CQ13748 450 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 APOFQ13790 326 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 PDE7AQ13946 482 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 DAG1Q14118 895 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 HEPACAMQ14CZ8 416 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 MLC1Q15049 377 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 VMACQ2NL98 169 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 GAB4Q2WGN9 574 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 CCNYL2Q5T2Q4 361 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 HMBOX1Q6NT76 420 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 ANKRD54Q6NXT1 300 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 SCIMPQ6UWF3 145 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 SUSD1Q6UWL2 747 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 TMC5Q6UXY8 1006 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 WASH2PQ6VEQ5 465 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 DET1Q7L5Y6 550 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 IFNEQ86WN2 208 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 VRK3Q8IV63 474 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 METTL4Q8N3J2 472 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 CBR4Q8N4T8 237 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 DTWD1Q8N5C7 304 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 TSPAN14Q8NG11 270 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 PJA1Q8NG27 643 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 OR5K1Q8NHB7 308 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNF420Q8TAQ5 688 aaPredicted RBP8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 ING5Q8WYH8 240 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 LZICQ8WZA0 190 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 SNX19Q92543 992 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 TFGQ92734 400 aaPredicted RBP8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 ARRDC3Q96B67 414 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 APOLD1Q96LR9 279 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 LRRC3BQ96PB8 259 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 SLC39A3Q9BRY0 314 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 SARGQ9BW04 601 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 GABARAPL1Q9H0R8 117 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 OR2AG1Q9H205 316 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 OR52A5Q9H2C5 316 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 TMEM38AQ9H6F2 299 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 C8orf33Q9H7E9 229 aaPredicted RBP8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 TM9SF3Q9HD45 589 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 NEUROD4Q9HD90 331 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 IL1RAPQ9NPH3 570 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 HPS4Q9NQG7 708 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 ADPRHL2Q9NX46 363 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 PTTG2Q9NZH5 202 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 ATXN10Q9UBB4 475 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 GIMAP2Q9UG22 337 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 PCDHB14Q9Y5E9 798 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 NOTCH4Q99466 2003 aa8.41□□□□□ -1.06
SNRNP40-202ENST00000373720 KIF26AQ9ULI4 1882 aaPredicted RBP8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 A0A0U1RQS6 177 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 ANKDD1BA6NHY2 528 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 FPGTO14772 594 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 ACOX3O15254 700 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 SLC16A6O15403 523 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 SCN2BO60939 215 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms