RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 ATP13A2Q9NQ11 1180 aa17.09■□□□□ 0.33
TRAPPC3-202ENST00000373162 SMYD2Q9NRG4 433 aa17.09■□□□□ 0.33
TRAPPC3-202ENST00000373162 CDC23Q9UJX2 597 aa17.09■□□□□ 0.33
TRAPPC3-202ENST00000373162 VWA7Q9Y334 891 aa17.09■□□□□ 0.33
TRAPPC3-202ENST00000373162 EFCAB8A8MWE9 144 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 NPPBP16860 134 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 ZNF37AP17032 561 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 FBLP22087 321 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 UQCRFS1P47985 274 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 MGAT5Q09328 741 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 TSTA3Q13630 321 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 INPP5JQ15735 1006 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 TUBB8Q3ZCM7 444 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 Q6ZS92 163 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 ANKMY2Q8IV38 441 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 ZC3H7AQ8IWR0 971 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 MYO1HQ8N1T3 1032 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 FBXO36Q8NEA4 188 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 ABHD11Q8NFV4 315 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 OR4K1Q8NGD4 311 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 MIEF2Q96C03 454 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 FBXL8Q96CD0 374 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 CABS1Q96KC9 395 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 KRT12Q99456 494 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 BARD1Q99728 777 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 CRB3Q9BUF7 120 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 PCBD2Q9H0N5 130 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 UTP6Q9NYH9 597 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 GRHL1Q9NZI5 618 aa17.08■□□□□ 0.32
TRAPPC3-202ENST00000373162 PRRC2CQ9Y520 2896 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 LOC102723996A0A087X1L8 192 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 TTLL8A6PVC2 850 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 TXNDC9O14530 226 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 LCMT2O60294 686 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 HPP00738 406 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 COX6A1P12074 109 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 BCL6P41182 706 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 PAFAH1B1P43034 410 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 AP1S2P56377 157 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 IL2P60568 153 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 RPS15AP62244 130 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 PDIA2Q13087 525 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 NAE1Q13564 534 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 PLEKHN1Q494U1 663 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 TMEM214Q6NUQ4 689 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 PRSS41Q7RTY9 318 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 SLC26A11Q86WA9 606 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 SPATA4Q8NEY3 305 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 ANKRD7Q92527 254 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 THAP11Q96EK4 314 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 MFRPQ9BY79 579 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 TRIM31Q9BZY9 425 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 DRC3Q9H069 523 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 ATG10Q9H0Y0 220 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 C14orf105Q9NVL8 296 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 LUZP4Q9P127 313 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 G3BP2Q9UN86 482 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 CDC14AQ9UNH5 594 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 NOVA2Q9UNW9 492 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 SNX24Q9Y343 169 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 CSAG2Q9Y5P2 127 aa17.07■□□□□ 0.32
TRAPPC3-202ENST00000373162 CPAMD8Q8IZJ3 1885 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 SPTBN1Q01082 2364 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 A0A0A6YYC8 382 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 FAM187AA6NFU0 413 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 I3L1I5 382 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 FFAR3O14843 346 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 GPR42O15529 346 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 KLHL41O60662 606 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 IPO13O94829 963 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 ENO2P09104 434 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 CCND1P24385 295 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 TAS2R39P59534 338 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 MRPS25P82663 173 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 OCA2Q04671 838 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 PDAP1Q13442 181 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 UBAP2LQ14157 1087 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 RBBP7Q16576 425 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 SYT16Q17RD7 645 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 DUPD1Q68J44 220 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 TMEM205Q6UW68 189 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 GPATCH11Q8N954 259 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 PSMF1Q92530 271 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 RERGQ96A58 199 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 ERP44Q9BS26 406 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 MKKSQ9NPJ1 570 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 C3orf18Q9UK00 162 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 B3GNT3Q9Y2A9 372 aa17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.06■□□□□ 0.32
TRAPPC3-202ENST00000373162 IDSB3KWA1 339 aa17.05■□□□□ 0.32
TRAPPC3-202ENST00000373162 PRPF4O43172 522 aaKnown RBP eCLIP17.05■□□□□ 0.32
TRAPPC3-202ENST00000373162 RAD51CO43502 376 aa17.05■□□□□ 0.32
TRAPPC3-202ENST00000373162 NSA2O95478 260 aaKnown RBP17.05■□□□□ 0.32
TRAPPC3-202ENST00000373162 ALPPP05187 535 aa17.05■□□□□ 0.32
TRAPPC3-202ENST00000373162 CDH1P12830 882 aa17.05■□□□□ 0.32
TRAPPC3-202ENST00000373162 THEMIS2Q5TEJ8 643 aa17.05■□□□□ 0.32
TRAPPC3-202ENST00000373162 ZNF572Q7Z3I7 529 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC3-202ENST00000373162 ADCK2Q7Z695 626 aa17.05■□□□□ 0.32
TRAPPC3-202ENST00000373162 CUZD1Q86UP6 607 aa17.05■□□□□ 0.32
TRAPPC3-202ENST00000373162 C17orf64Q86WR6 236 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms