RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 EPYCQ99645 322 aa12.33□□□□□ -0.43
CTPS1-202ENST00000372621 GABARAPL3Q9BY60 117 aa12.33□□□□□ -0.43
CTPS1-202ENST00000372621 SUV39H2Q9H5I1 410 aa12.33□□□□□ -0.43
CTPS1-202ENST00000372621 OSGIN1Q9UJX0 560 aa12.33□□□□□ -0.43
CTPS1-202ENST00000372621 PCDHB11Q9Y5F2 797 aa12.33□□□□□ -0.43
CTPS1-202ENST00000372621 CXorf51AA0A1B0GTR3 108 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 C1orf226A1L170 272 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 CLDN24A6NM45 220 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 TTC34A8MYJ7 566 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 ATP1B2P14415 290 aaPredicted RBP12.33□□□□□ -0.44
CTPS1-202ENST00000372621 PSMB9P28065 219 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 HALP42357 657 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 MAGEA8P43361 318 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 STK19P49842 368 aaPredicted RBP12.33□□□□□ -0.44
CTPS1-202ENST00000372621 CREMQ03060 361 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 DGCR6Q14129 220 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 UBE2UQ5VVX9 321 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 TMEM236Q5W0B7 351 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 SERPINA13PQ6UXR4 307 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 CCDC81Q6ZN84 652 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 HTR3DQ70Z44 454 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 BBS7Q8IWZ6 715 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 ENTHD1Q8IYW4 607 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 SKA2Q8WVK7 121 aaPredicted RBP12.33□□□□□ -0.44
CTPS1-202ENST00000372621 IPCEF1Q8WWN9 437 aaPredicted RBP12.33□□□□□ -0.44
CTPS1-202ENST00000372621 PSD2Q9BQI7 771 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 ATG10Q9H0Y0 220 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 REEP1Q9H902 201 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 VPS29Q9UBQ0 182 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 TMEM247A6NEH6 219 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 FAM20BO75063 409 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 LAMP1P11279 417 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 COX7A2P14406 83 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 CYP2A7P20853 494 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 SPINT3P49223 89 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 SNRPD1P62314 119 aaKnown RBP12.33□□□□□ -0.44
CTPS1-202ENST00000372621 INAQ16352 499 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 FAM43BQ6ZT52 329 aaPredicted RBP12.33□□□□□ -0.44
CTPS1-202ENST00000372621 NEK10Q6ZWH5 1172 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 TSEN54Q7Z6J9 526 aaKnown RBP12.33□□□□□ -0.44
CTPS1-202ENST00000372621 SNX29P2Q8IUI4 249 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 HRASLS5Q96KN8 279 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 SPATA9Q9BWV2 254 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 SRRDQ9UH36 339 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 PCDHGA6Q9Y5G7 932 aa12.33□□□□□ -0.44
CTPS1-202ENST00000372621 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 SGTAO43765 313 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 FKBP9O95302 570 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 C9P02748 559 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 SERPINB10P48595 397 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 CAMK2GQ13555 558 aaPredicted RBP12.32□□□□□ -0.44
CTPS1-202ENST00000372621 RAB33AQ14088 237 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 MPPE1Q53F39 396 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 PAGE2BQ5JRK9 111 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 PERM1Q5SV97 790 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 ZDHHC20Q5W0Z9 365 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 PDE12Q6L8Q7 609 aaKnown RBP12.32□□□□□ -0.44
CTPS1-202ENST00000372621 FAM124AQ86V42 546 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 ATG16L2Q8NAA4 619 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 RPL3LQ92901 407 aaKnown RBP12.32□□□□□ -0.44
CTPS1-202ENST00000372621 LGALS12Q96DT0 336 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 CPEB1Q9BZB8 566 aaKnown RBP12.32□□□□□ -0.44
CTPS1-202ENST00000372621 ASPSCR1Q9BZE9 553 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 TPT1P8Q9HAU6 139 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 RASSF1Q9NS23 344 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 KIF17Q9P2E2 1029 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 HS3ST2Q9Y278 367 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 PRRG1O14668 218 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 CPSF4O95639 269 aaKnown RBP12.32□□□□□ -0.44
CTPS1-202ENST00000372621 NUDT7P0C024 238 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 RAE1P78406 368 aaKnown RBP12.32□□□□□ -0.44
CTPS1-202ENST00000372621 TCEAL8Q8IYN2 117 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 DNASE1L2Q92874 299 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 BBS2Q9BXC9 721 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 PAIP2BQ9ULR5 123 aaKnown RBP12.32□□□□□ -0.44
CTPS1-202ENST00000372621 RUVBL1Q9Y265 456 aaKnown RBP12.32□□□□□ -0.44
CTPS1-202ENST00000372621 PADI2Q9Y2J8 665 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 INSL5Q9Y5Q6 135 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 PLXNA2O75051 1894 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 SCAMP2O15127 329 aaKnown RBP12.32□□□□□ -0.44
CTPS1-202ENST00000372621 GCM2O75603 506 aaPredicted RBP12.32□□□□□ -0.44
CTPS1-202ENST00000372621 LCKP06239 509 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 ABCB1P08183 1280 aaPredicted RBP12.32□□□□□ -0.44
CTPS1-202ENST00000372621 TGFBR1P36897 503 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 PXNP49023 591 aaPredicted RBP12.32□□□□□ -0.44
CTPS1-202ENST00000372621 EPHB3P54753 998 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 CD300CQ08708 224 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 KCNC3Q14003 757 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 CAMKMTQ7Z624 323 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 ADCK1Q86TW2 530 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 SH3KBP1Q96B97 665 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 METTL2AQ96IZ6 378 aaKnown RBP12.32□□□□□ -0.44
CTPS1-202ENST00000372621 ATAD3AQ9NVI7 634 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 BTNL2Q9UIR0 455 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 AP1M2Q9Y6Q5 423 aa12.32□□□□□ -0.44
CTPS1-202ENST00000372621 CSNK2BP67870 215 aa12.31□□□□□ -0.44
CTPS1-202ENST00000372621 SP3Q02447 781 aa12.31□□□□□ -0.44
CTPS1-202ENST00000372621 IRF8Q02556 426 aa12.31□□□□□ -0.44
CTPS1-202ENST00000372621 PCDH1Q08174 1060 aa12.31□□□□□ -0.44
CTPS1-202ENST00000372621 SF1Q15637 639 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms