RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 UQCRBP14927 111 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 VARSP26640 1264 aaKnown RBP16.7■□□□□ 0.26
UBE3D-203ENST00000369747 GRIA3P42263 894 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 CASP2P42575 452 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 KRT6CP48668 564 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 BNIP2Q12982 314 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 MAD2L1Q13257 205 aaPredicted RBP16.7■□□□□ 0.26
UBE3D-203ENST00000369747 PTGR1Q14914 329 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 KIAA0040Q15053 153 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 IMPG1Q17R60 797 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 NANOGP8Q6NSW7 305 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 HOMEZQ8IX15 550 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 L3MBTL4Q8NA19 623 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 ADCY4Q8NFM4 1077 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 FBXL8Q96CD0 374 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 NR1H4Q96RI1 486 aaPredicted RBP16.7■□□□□ 0.26
UBE3D-203ENST00000369747 ACPTQ9BZG2 426 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 NANOGQ9H9S0 305 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 ASIC5Q9NY37 505 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 EGFL7Q9UHF1 273 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 SLC22A14Q9Y267 594 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 R4GN57 208 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 GPR179Q6PRD1 2367 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 IFRD1O00458 451 aaPredicted RBP16.7■□□□□ 0.26
UBE3D-203ENST00000369747 PRAMEF4O60810 478 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 SEC22BO75396 215 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 STAMBPO95630 424 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 TNFP01375 233 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 GSK3BP49841 420 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 CLCNKAP51800 687 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 DGKQP52824 942 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.7■□□□□ 0.26
UBE3D-203ENST00000369747 PRAMEF9Q5VWM5 478 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 SLC30A9Q6PML9 568 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 DLEU7Q6UYE1 221 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 PHACTR4Q8IZ21 702 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 ICA1LQ8NDH6 482 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 ATG10Q9H0Y0 220 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 DPEP2Q9H4A9 486 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 PRDM8Q9NQV8 689 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 DNAJC11Q9NVH1 559 aa16.7■□□□□ 0.26
UBE3D-203ENST00000369747 TRNAU1APQ9NX07 287 aaKnown RBP16.7■□□□□ 0.26
UBE3D-203ENST00000369747 CFAP20Q9Y6A4 193 aaKnown RBP16.7■□□□□ 0.26
UBE3D-203ENST00000369747 FANCMQ8IYD8 2048 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 TP53BP1Q12888 1972 aaPredicted RBP16.69■□□□□ 0.26
UBE3D-203ENST00000369747 A0A1B0GTW7 788 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 ZNF839A8K0R7 811 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 SMNDC1O75940 238 aaKnown RBP eCLIP16.69■□□□□ 0.26
UBE3D-203ENST00000369747 EML2O95834 649 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 JUNDP17535 347 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 C21orf59P57076 290 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 RPA4Q13156 261 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 IRAK1BP1Q5VVH5 260 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 LCN8Q6JVE9 175 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 SUSD1Q6UWL2 747 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 NRROSQ86YC3 692 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 LIX1Q8N485 282 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 CATSPER1Q8NEC5 780 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 LRTOMTQ8WZ04 291 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 TMEM74Q96NL1 305 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 BTBD9Q96Q07 612 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 ALG2Q9H553 416 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 C1orf109Q9NX04 203 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 ACTR3BQ9P1U1 418 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 TBC1D29Q9UFV1 150 aa16.69■□□□□ 0.26
UBE3D-203ENST00000369747 ARHGEF17Q96PE2 2063 aaPredicted RBP16.69■□□□□ 0.26
UBE3D-203ENST00000369747 KLHL33A6NCF5 533 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 AQP12BA6NM10 295 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 CSF2P04141 144 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 GNSP15586 552 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 ACADLP28330 430 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 ACTR1BP42025 376 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 ACTR1AP61163 376 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 BNC1Q01954 994 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 PLOD1Q02809 727 aaPredicted RBP16.68■□□□□ 0.26
UBE3D-203ENST00000369747 LIPEQ05469 1076 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 C1orf61Q13536 156 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 PRRT3Q5FWE3 981 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 PTRH1Q86Y79 214 aaKnown RBP16.68■□□□□ 0.26
UBE3D-203ENST00000369747 SYT12Q8IV01 421 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 AQP12AQ8IXF9 295 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 CANT1Q8WVQ1 401 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 SELENOMQ8WWX9 145 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 APOBEC3BQ9UH17 382 aaKnown RBP16.68■□□□□ 0.26
UBE3D-203ENST00000369747 CIDEBQ9UHD4 219 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 ACSL5Q9ULC5 683 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 SNX6Q9UNH7 406 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 MAGEA13PA6NCF6 341 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 ARPC2O15144 300 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 NME1P15531 152 aaKnown RBP16.68■□□□□ 0.26
UBE3D-203ENST00000369747 NEK2P51955 445 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 EEFSECP57772 596 aaKnown RBP16.68■□□□□ 0.26
UBE3D-203ENST00000369747 CCSMST1Q4G0I0 132 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 CACHD1Q5VU97 1274 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 TMEM154Q6P9G4 183 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 PDZD3Q86UT5 571 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 SPPL2CQ8IUH8 684 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 FAM110BQ8TC76 370 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 GPBAR1Q8TDU6 330 aa16.68■□□□□ 0.26
UBE3D-203ENST00000369747 LRRC61Q9BV99 259 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms