RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 SPATA7Q9P0W8 599 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 ARPC2O15144 300 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 PMM2O15305 246 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 TSPAN6O43657 245 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 PRKD3O94806 890 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 PGLSO95336 258 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 ADH1BP00325 375 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 STC1P52823 247 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 PDX1P52945 283 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 NTHL1P78549 312 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 SEMA3AQ14563 771 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 TSC22D1Q15714 1073 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 ZNF627Q7L945 461 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 PLD6Q8N2A8 252 aaKnown RBP12.53□□□□□ -0.4
PTPRK-207ENST00000368226 SVOPLQ8N434 492 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 OR4K17Q8NGC6 315 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 WDR60Q8WVS4 1066 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 TMEM40Q8WWA1 233 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 CLCC1Q96S66 551 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 LRRC3Q9BY71 257 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 OSBPL7Q9BZF2 842 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 HRASLS2Q9NWW9 162 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 CDC14AQ9UNH5 594 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 ACTL7AQ9Y615 435 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 FAM208AQ9UK61 1670 aaKnown RBP12.53□□□□□ -0.4
PTPRK-207ENST00000368226 FAM240BA0A1B0GVZ2 78 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 DLDP09622 509 aaKnown RBP12.53□□□□□ -0.4
PTPRK-207ENST00000368226 CKMT2P17540 419 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 CRTC1Q6UUV9 634 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 TMIGD1Q6UXZ0 262 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 LGI4Q8N135 537 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 GJD3Q8N144 294 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 ZNF527Q8NB42 609 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 OR2L3Q8NG85 312 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 OR4K1Q8NGD4 311 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 MAPK15Q8TD08 544 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 TCF7L1Q9HCS4 588 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 TRBC2A0A5B9 178 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 TBX1O43435 398 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 KLK3P07288 261 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-207ENST00000368226 PTX3P26022 381 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-207ENST00000368226 NUDT6P53370 316 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 DSC3Q14574 896 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 LCN1P1Q5VSP4 162 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 HSDL2Q6YN16 418 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 SERINC5Q86VE9 423 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 P2RY8Q86VZ1 359 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 TICAM1Q8IUC6 712 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 TTC9BQ8N6N2 239 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 PXYLP1Q8TE99 480 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 DDX1Q92499 740 aaKnown RBP12.53□□□□□ -0.4
PTPRK-207ENST00000368226 MMABQ96EY8 250 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-207ENST00000368226 IL17FQ96PD4 163 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 COMMD3Q9UBI1 195 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 ING4Q9UNL4 249 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 BLOC1S5-TXNDC5H3BN57 136 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 SMAD9O15198 467 aaKnown RBP12.53□□□□□ -0.4
PTPRK-207ENST00000368226 SDC3O75056 442 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 JMJD7P0C870 316 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 ATP5A1P25705 553 aaKnown RBP12.53□□□□□ -0.4
PTPRK-207ENST00000368226 PLEKHG6Q3KR16 790 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 SLC39A5Q6ZMH5 540 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 RAB8BQ92930 207 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 NLE1Q9NVX2 485 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-207ENST00000368226 CYTH4Q9UIA0 394 aa12.53□□□□□ -0.4
PTPRK-207ENST00000368226 PFKMP08237 780 aa12.52□□□□□ -0.4
PTPRK-207ENST00000368226 PON2Q15165 354 aa12.52□□□□□ -0.4
PTPRK-207ENST00000368226 KCNH6Q9H252 994 aa12.52□□□□□ -0.4
PTPRK-207ENST00000368226 TEX264Q9Y6I9 313 aa12.52□□□□□ -0.4
PTPRK-207ENST00000368226 FEZF1A0PJY2 475 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 PRORSD1PA6NEY8 169 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 ACADLP28330 430 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 FAUP35544 74 aaKnown RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 GMPRP36959 345 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 SCNN1AP37088 669 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 RAB25P57735 213 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 TSPAN5P62079 268 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 XIAPP98170 497 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 LASP1Q14847 261 aaKnown RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 PPP1R3AQ16821 1122 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 ACSBG2Q5FVE4 666 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 ERN2Q76MJ5 926 aaKnown RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 ZNF761Q86XN6 746 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 SAMD14Q8IZD0 417 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 APCDD1Q8J025 514 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 PHTF2Q8N3S3 785 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 OR9A1PQ8NGU1 263 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 OR5K1Q8NHB7 308 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 MR1Q95460 341 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 TGM7Q96PF1 710 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 TBC1D24Q9ULP9 559 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 FKBP7Q9Y680 259 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 A0A0U1RQS6 177 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 CLPXO76031 633 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 PGRP06401 933 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 XRCC1P18887 633 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-207ENST00000368226 MATN1P21941 496 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 TGFBIQ15582 683 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 DUOXA1Q1HG43 343 aa12.52□□□□□ -0.41
PTPRK-207ENST00000368226 PRPF38BQ5VTL8 546 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms