RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ZNF697Q5TEC3 545 aa10.8□□□□□ -0.68
CDC42BPA-205ENST00000366769 SHC3Q92529 594 aa10.8□□□□□ -0.68
CDC42BPA-205ENST00000366769 AURKBQ96GD4 344 aaPredicted RBP10.8□□□□□ -0.68
CDC42BPA-205ENST00000366769 IFT22Q9H7X7 185 aa10.8□□□□□ -0.68
CDC42BPA-205ENST00000366769 OR7A17O14581 309 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 IL12BP29460 328 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 ELAVL2Q12926 359 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 TATDN1Q6P1N9 297 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 BBS12Q6ZW61 710 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 POLR1EQ9GZS1 481 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 CARS2Q9HA77 564 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 ASAH2Q9NR71 780 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 TMEM45AQ9NWC5 275 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 TRAFD1O14545 582 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 IFNA17P01571 189 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 CAPNS1P04632 268 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 STAG3L4Q8TBR4 150 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 MUS81Q96NY9 551 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 PCDHB18PQ96TA0 734 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 ARMC1Q9NVT9 282 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 COPS3Q9UNS2 423 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 IQCF5A8MTL0 148 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 TRBC1P01850 177 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 C8BP07358 591 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 S100PP25815 95 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 PITPNAQ00169 270 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 ARFRP1Q13795 201 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 CBX2Q14781 532 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 ZDHHC21Q8IVQ6 265 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 LZTR1Q8N653 840 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 C3orf49Q96BT1 292 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 C3orf14Q9HBI5 128 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 NLKQ9UBE8 527 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 UXTQ9UBK9 157 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 PCDHB3Q9Y5E6 796 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 SCELO95171 688 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 SLC25A14O95258 325 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 RASGEF1BQ0VAM2 473 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 ATP6AP1Q15904 470 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 METTL7BQ6UX53 244 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 SP8Q8IXZ3 490 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 OR6K6Q8NGW6 343 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 SLC25A36Q96CQ1 311 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 CCDC106Q9BWC9 280 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 GLS2Q9UI32 602 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 SIX6O95475 246 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 AHCYP23526 432 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 PSEN2P49810 448 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 ATP6V0D1P61421 351 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 CD300CQ08708 224 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 TAPT1Q6NXT6 567 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 HSDL2Q6YN16 418 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 TMPRSS9Q7Z410 1059 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 CHD1O14646 1710 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 LOC100130705A0A1B0GUX0 176 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 AGAP5A6NIR3 686 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 PAHP00439 452 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 LAMP2P13473 410 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 GABARAPL2P60520 117 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 SIGIRRQ6IA17 410 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 IDO2Q6ZQW0 420 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 TMPRSS11BQ86T26 416 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 TREX2Q9BQ50 279 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 INIPQ9NRY2 104 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 UPB1Q9UBR1 384 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 PAPSS2O95340 614 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 PCCBP05166 539 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 UBL4AP11441 157 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 LINGO1Q96FE5 620 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 ZNF641Q96N77 438 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 SERPINB11Q96P15 392 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 ASB2Q96Q27 587 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 PIP5K1BO14986 540 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 VAMP1P23763 118 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 MSX1P28360 303 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 NFIXQ14938 502 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 CDK10Q15131 360 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 PTPRNQ16849 979 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 HMGB4Q8WW32 186 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 HSH2DQ96JZ2 352 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 TMEM27Q9HBJ8 222 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 LTN1O94822 1766 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 CACNB4O00305 520 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 COTL1Q14019 142 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 FSTL4Q6MZW2 842 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 SDR16C5Q8N3Y7 309 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 OR8S1Q8NH09 359 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 NANPQ8TBE9 248 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 LENG9Q96B70 501 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 BIRC7Q96CA5 298 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 RNF157Q96PX1 679 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 PHB2Q99623 299 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 UFSP2Q9NUQ7 469 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 FARSAQ9Y285 508 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 NCOR1O75376 2440 aa10.79□□□□□ -0.68
CDC42BPA-205ENST00000366769 NOTCH3Q9UM47 2321 aa10.78□□□□□ -0.68
CDC42BPA-205ENST00000366769 RGS9O75916 674 aaPredicted RBP10.78□□□□□ -0.68
CDC42BPA-205ENST00000366769 FABP1P07148 127 aa10.78□□□□□ -0.68
CDC42BPA-205ENST00000366769 PUM1Q14671 1186 aaKnown RBP eCLIP10.78□□□□□ -0.682e-6■■□□□ 13.3
CDC42BPA-205ENST00000366769 C2orf76Q3KRA6 126 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms