RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 IGLV3-12A0A075B6K2 115 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 A0A087X1B8 175 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 TRBC2A0A5B9 178 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 VSTM2BA6NLU5 285 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 NRP2O60462 931 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 KLHL41O60662 606 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 INHBAP08476 426 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 ABHD2P08910 425 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 FURINP09958 794 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 SLC35G6P0C7Q6 338 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 SLC35E2BP0CK96 405 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 CDH1P12830 882 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 CNTFP26441 200 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 GSTM2P28161 218 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 GGT5P36269 586 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 SERPINB9P50453 376 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 PGGT1BP53609 377 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 SKP1P63208 163 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 DSG2Q14126 1118 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 CSHL1Q14406 222 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 ATP1A1-AS1Q5TC04 95 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 SULT1C3Q6IMI6 304 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 GPSM1Q86YR5 675 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 ARHGEF39Q8N4T4 335 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 PDPRQ8NCN5 879 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 C9orf43Q8TAL5 461 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-218ENST00000366747 STAG3L4Q8TBR4 150 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 ALKBH8Q96BT7 664 aaKnown RBP13.95□□□□□ -0.18
MRPL55-218ENST00000366747 RHBDF1Q96CC6 855 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 C10orf90Q96M02 699 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 FER1L6-AS2Q96M78 137 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 PITHD1Q9GZP4 211 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-218ENST00000366747 DRC3Q9H069 523 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 L2HGDHQ9H9P8 463 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 SLC22A11Q9NSA0 550 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 C14orf105Q9NVL8 296 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 GPRC5BQ9NZH0 403 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 ZNF282Q9UDV7 671 aaPredicted RBP13.95□□□□□ -0.18
MRPL55-218ENST00000366747 ZNF180Q9UJW8 692 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 TLK1Q9UKI8 766 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 IKZF3Q9UKT9 509 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 G3BP2Q9UN86 482 aaKnown RBP13.95□□□□□ -0.18
MRPL55-218ENST00000366747 IKBKGQ9Y6K9 419 aa13.95□□□□□ -0.18
MRPL55-218ENST00000366747 SNRNP200O75643 2136 aaKnown RBP13.94□□□□□ -0.18
MRPL55-218ENST00000366747 A0A087WUV0 522 aaPredicted RBP13.94□□□□□ -0.18
MRPL55-218ENST00000366747 H0YIG0 161 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 PEX12O00623 359 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 SEC16AO15027 2179 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 CYC1P08574 325 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 LTA4HP09960 611 aaKnown RBP13.94□□□□□ -0.18
MRPL55-218ENST00000366747 GNAZP19086 355 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 CXCR2P25025 360 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 SLC6A12P48065 614 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 SERPINB8P50452 374 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 NFKB2Q00653 900 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 OCA2Q04671 838 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 PWP1Q13610 501 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 NKG7Q16617 165 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 FAM83EQ2M2I3 478 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 ZXDCQ2QGD7 858 aaPredicted RBP13.94□□□□□ -0.18
MRPL55-218ENST00000366747 TCTN3Q6NUS6 607 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 COX15Q7KZN9 410 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 TRMT10CQ7L0Y3 403 aaKnown RBP13.94□□□□□ -0.18
MRPL55-218ENST00000366747 VN1R4Q7Z5H5 301 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 MRGPREQ86SM8 312 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 ASPGQ86U10 573 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 THOC6Q86W42 341 aaKnown RBP13.94□□□□□ -0.18
MRPL55-218ENST00000366747 ZNF843Q8N446 348 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 MFSD9Q8NBP5 474 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 NBEAQ8NFP9 2946 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 SLC44A1Q8WWI5 657 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 PYCR2Q96C36 320 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 TM4SF19Q96DZ7 209 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 SEC16BQ96JE7 1060 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 OR4K3Q96R72 315 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 SPSB2Q99619 263 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 AIF1LQ9BQI0 150 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 ACSS2Q9NR19 701 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 SEMA3GQ9NS98 782 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 ACOT9Q9Y305 439 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 MAP4K5Q9Y4K4 846 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 PCDHGB7Q9Y5F8 929 aa13.94□□□□□ -0.18
MRPL55-218ENST00000366747 PCDHGA9Q9Y5G4 932 aaKnown RBP13.94□□□□□ -0.18
MRPL55-218ENST00000366747 SPTBP11277 2137 aa13.93□□□□□ -0.18
MRPL55-218ENST00000366747 SYCE1LA8MT33 242 aa13.93□□□□□ -0.18
MRPL55-218ENST00000366747 KERAO60938 352 aa13.93□□□□□ -0.18
MRPL55-218ENST00000366747 FAM155BO75949 473 aa13.93□□□□□ -0.18
MRPL55-218ENST00000366747 C1QL1O75973 258 aa13.93□□□□□ -0.18
MRPL55-218ENST00000366747 KRT38O76015 456 aa13.93□□□□□ -0.18
MRPL55-218ENST00000366747 NSA2O95478 260 aaKnown RBP13.93□□□□□ -0.18
MRPL55-218ENST00000366747 ACSL3O95573 720 aa13.93□□□□□ -0.18
MRPL55-218ENST00000366747 S100BP04271 92 aaPredicted RBP13.93□□□□□ -0.18
MRPL55-218ENST00000366747 FBLP22087 321 aaKnown RBP13.93□□□□□ -0.18
MRPL55-218ENST00000366747 MMP11P24347 488 aa13.93□□□□□ -0.18
MRPL55-218ENST00000366747 AHRP35869 848 aa13.93□□□□□ -0.18
MRPL55-218ENST00000366747 AVPR1BP47901 424 aa13.93□□□□□ -0.18
MRPL55-218ENST00000366747 CSRP3P50461 194 aa13.93□□□□□ -0.18
MRPL55-218ENST00000366747 EFTUD2Q15029 972 aaKnown RBP eCLIP13.93□□□□□ -0.181e-12■■■■■ 43.4
MRPL55-218ENST00000366747 HKDC1Q2TB90 917 aa13.93□□□□□ -0.18
MRPL55-218ENST00000366747 KLC3Q6P597 504 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms