RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 RCOR2Q8IZ40 523 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 LSMEM2Q8N112 164 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 RAB42Q8N4Z0 105 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 NKAIN3Q8N8D7 197 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 CCDC63Q8NA47 563 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 OR2T6Q8NHC8 308 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 RIT1Q92963 219 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 MR1Q95460 341 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 ART5Q96L15 291 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 LPAR4Q99677 370 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 CLEC7AQ9BXN2 247 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 GRPEL1Q9HAV7 217 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 KLHL8Q9P2G9 620 aaPredicted RBP3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 MAN1B1Q9UKM7 699 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 GTF3C4Q9UKN8 822 aa3.72□□□□□ -1.81
RNU6-560P-201ENST00000364007 TRBV4-1A0A0J9YWV2 114 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 A0A1W2PR80 420 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 MTMR11A4FU01 709 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 F8VVB4 439 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 F8VWA3 439 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 DUS4LO95620 317 aaKnown RBP3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 VTNP04004 478 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 RPN1P04843 607 aaKnown RBP3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 CD59P13987 128 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 TIA1P31483 386 aaKnown RBP eCLIP3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 SFTPDP35247 375 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 OPRL1P41146 370 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 SOX3P41225 446 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 KCNJ1P48048 391 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 SLC6A12P48065 614 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 XGP55808 180 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 SULT2A1Q06520 285 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 TMEM132DQ14C87 1099 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 PTPN14Q15678 1187 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 TTC27Q6P3X3 843 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 CPEB2Q7Z5Q1 589 aaKnown RBP3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 DZIP1Q86YF9 867 aaKnown RBP3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 TIGD4Q8IY51 512 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 WDSUB1Q8N9V3 476 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 UXS1Q8NBZ7 420 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 HCAR2Q8TDS4 363 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 FAM162AQ96A26 154 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 CENPTQ96BT3 561 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 NKX3-1Q99801 234 aaPredicted RBP3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 PITPNM3Q9BZ71 974 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 PRDM4Q9UKN5 801 aa3.71□□□□□ -1.82
RNU6-560P-201ENST00000364007 IL16Q14005 1332 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 IGSF1Q8N6C5 1336 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 A0A087WUV0 522 aaPredicted RBP3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 H3BMM5 538 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 TEX28O15482 410 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 FLRT2O43155 660 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 ST8SIA3O43173 380 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 MAGEC1O60732 1142 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 GAS8-AS1O95177 125 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 RPL35AP18077 110 aaKnown RBP3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 CYP2A7P20853 494 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 SSTR1P30872 391 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 TRIM29Q14134 588 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 MTF1Q14872 753 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 SGSM1Q2NKQ1 1148 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 C5orf24Q7Z6I8 188 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 CROCCP3Q8IVE0 287 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 GBP7Q8N8V2 638 aaPredicted RBP3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 GATAD1Q8WUU5 269 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 NXPE2Q96DL1 559 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 RBM41Q96IZ5 413 aaKnown RBP3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 CCDC114Q96M63 670 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 FAM218AQ96MZ4 157 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 BTBD9Q96Q07 612 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 ASCL2Q99929 193 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 CDK19Q9BWU1 502 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 RNF121Q9H920 327 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 PPP1R3CQ9UQK1 317 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 RUVBL2Q9Y230 463 aaKnown RBP3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 KLK4Q9Y5K2 254 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 CACNA1FO60840 1977 aa3.7□□□□□ -1.82
RNU6-560P-201ENST00000364007 GLTPD2A6NH11 291 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 C15orf61A6NNL5 157 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 TMEM150CB9EJG8 249 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 SLU7O95391 586 aaKnown RBP3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 RLN1P04808 185 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 DLATP10515 647 aaKnown RBP3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 CASTP20810 708 aaKnown RBP3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 ELAVL4P26378 380 aaKnown RBP3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 SCN1BQ07699 218 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 DRP2Q13474 957 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 CDH18Q13634 790 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 PTK6Q13882 451 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 E2F5Q15329 346 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 CDO1Q16878 200 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 FAM46CQ5VWP2 391 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 FUT10Q6P4F1 479 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 NOTUMQ6P988 496 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 PRSS55Q6UWB4 352 aaPredicted RBP3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 SLC24A5Q71RS6 500 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 ANKRD23Q86SG2 305 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 KRTAP7-1Q8IUC3 87 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 KLHL7Q8IXQ5 586 aa3.69□□□□□ -1.82
RNU6-560P-201ENST00000364007 NHLRC2Q8NBF2 726 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms