RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 BMP15O95972 392 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 LDLRP01130 860 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 ATP5BP06576 529 aaKnown RBP5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 KRT19P08727 400 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 RAB40ALP0C0E4 278 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 ZNF286BP0CG31 522 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 GOLGA8HP0CJ92 632 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 TOP1P11387 765 aaKnown RBP5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 GM2AP17900 193 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 TNNT3P45378 269 aaPredicted RBP5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 LTBQ06643 244 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 MZT1Q08AG7 82 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 PRKAA1Q13131 559 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 ALX1Q15699 326 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 TCEAL5Q5H9L2 206 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 GRTP1Q5TC63 336 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 KLC3Q6P597 504 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 PLEKHM3Q6ZWE6 761 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 DET1Q7L5Y6 550 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 ZNF589Q86UQ0 364 aaPredicted RBP5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 KMT5CQ86Y97 462 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 TBC1D10CQ8IV04 446 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 ZNF441Q8N8Z8 693 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 LILRB1Q8NHL6 650 aaPredicted RBP5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 ROBO4Q8WZ75 1007 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 DAZLQ92904 295 aaKnown RBP5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 FAM162AQ96A26 154 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 SPSB1Q96BD6 273 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 MRPL38Q96DV4 380 aaKnown RBP5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 SFXN2Q96NB2 322 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 LRRC3BQ96PB8 259 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 NEURL2Q9BR09 285 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 LMF2Q9BU23 707 aaKnown RBP5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 NACAP1Q9BZK3 213 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 UBTD1Q9HAC8 227 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 MALT1Q9UDY8 824 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 DLGAP4Q9Y2H0 992 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 NME7Q9Y5B8 376 aa5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 COL11A1P12107 1806 aaPredicted RBP5.3□□□□□ -1.56
RNU4-39P-201ENST00000362455 DMDP11532 3685 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 TCF20Q9UGU0 1960 aaKnown RBP5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 A0A1W2PPQ1 181 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 ELOVL7A1L3X0 281 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 C5orf60A6NFR6 353 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 PTGESO14684 152 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 GH1P01241 217 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 CASTP20810 708 aaKnown RBP5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 AZGP1P25311 298 aaKnown RBP5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 ARCN1P48444 511 aaKnown RBP5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 SLC9A3P48764 834 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 MMP15P51511 669 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 CAPZA1P52907 286 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 LIMK1P53667 647 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 TPD52P55327 224 aaPredicted RBP5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 SNTA1Q13424 505 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 HSDL1Q3SXM5 330 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 USH1GQ495M9 461 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 MPP7Q5T2T1 576 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 DGLUCYQ7Z3D6 616 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 SERINC5Q86VE9 423 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 SFR1Q86XK3 245 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 PTOV1Q86YD1 416 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 FAM114A1Q8IWE2 563 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 PRSS33Q8NF86 280 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 OR5M8Q8NGP6 311 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 EXT2Q93063 718 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 TOP1MTQ969P6 601 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 BICD1Q96G01 975 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 ZNF479Q96JC4 524 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 MUS81Q96NY9 551 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 TRPC7Q9HCX4 862 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 MYNNQ9NPC7 610 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 RASAL2Q9UJF2 1139 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 RALYQ9UKM9 306 aaKnown RBP5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 PADI2Q9Y2J8 665 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 SPIN1Q9Y657 262 aaPredicted RBP5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 CFAP54Q96N23 3096 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 WDR87Q6ZQQ6 2873 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 TET1Q8NFU7 2136 aa5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 ZNFX1Q9P2E3 1918 aaKnown RBP5.29□□□□□ -1.56
RNU4-39P-201ENST00000362455 CACNA1HO95180 2353 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 A0A0D9SFI3 127 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 TEX13DA0A0J9YY54 714 aaPredicted RBP5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 ANXA2P2A6NMY6 339 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 C4orf47A7E2U8 309 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 RSPH10B2B2RC85 870 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 CLIC2O15247 247 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 LINC01565O15544 149 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 SLC7A4O43246 635 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 TGDSO95455 350 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 RSPH10BP0C881 870 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 CDH1P12830 882 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 EEF1B2P24534 225 aaKnown RBP5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 DNAJB1P25685 340 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 HOXC13P31276 330 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 CCKBRP32239 447 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 PRKCIP41743 596 aa5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 CDKN2AP42771 156 aaKnown RBP5.28□□□□□ -1.56
RNU4-39P-201ENST00000362455 HTR6P50406 440 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms